Gene
RNA
| Item | Value |
|---|---|
| gene id | G2145629 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 6205279 ~ 6233514 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2453889 | False | 208 | lncRNA | 0.55 | 3 | 6205279 | 6233514 |
| TU2453890 | True | 321 | lncRNA | 0.49 | 2 | 6211516 | 6233514 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118945553 | NA | coding | downstream | 308195 | 5896903 ~ 5897084 (-) |
| LOC118945579 | NA | coding | downstream | 308757 | 5896406 ~ 5929252 (-) |
| LOC110511721 | NA | coding | downstream | 377367 | 5827044 ~ 5827912 (-) |
| trnaa-cgc-8 | NA | coding | downstream | 411514 | 5793694 ~ 5793765 (-) |
| trnaa-cgc-7 | NA | coding | downstream | 422251 | 5782957 ~ 5783028 (-) |
| LOC110509559 | NA | coding | upstream | 347686 | 6579264 ~ 6594474 (-) |
| LOC118945709 | NA | coding | upstream | 360303 | 6593817 ~ 6593895 (-) |
| LOC118945279 | NA | coding | upstream | 371803 | 6605317 ~ 6607608 (-) |
| LOC110509561 | LOC106562926 | coding | upstream | 436662 | 6670176 ~ 6688054 (-) |
| LOC110509562 | LOC106562929 | coding | upstream | 456028 | 6689542 ~ 6712436 (-) |
| G2145544 | NA | non-coding | downstream | 12180 | 5874956 ~ 6193099 (-) |
| G2145548 | NA | non-coding | downstream | 55179 | 6143215 ~ 6150100 (-) |
| G2145614 | LOC106586052 | non-coding | downstream | 68394 | 6130249 ~ 6136885 (-) |
| G2145606 | NA | non-coding | downstream | 80570 | 6102907 ~ 6124709 (-) |
| G2145600 | NA | non-coding | downstream | 85994 | 6096992 ~ 6119285 (-) |
| G2145543 | NA | non-coding | upstream | 5502 | 6239016 ~ 6285258 (-) |
| G2145547 | NA | non-coding | upstream | 18407 | 6251921 ~ 6266983 (-) |
| G2145637 | NA | non-coding | upstream | 27849 | 6261363 ~ 6276405 (-) |
| G2145689 | NA | non-coding | upstream | 107556 | 6341070 ~ 6341736 (-) |
| G2145702 | NA | non-coding | upstream | 116425 | 6349939 ~ 6350224 (-) |
| G2145618 | LOC106591448 | other | downstream | 56785 | 6141066 ~ 6148494 (-) |
| G2145604 | NA | other | downstream | 96527 | 6100771 ~ 6108752 (-) |
| G2145511 | NA | other | downstream | 397655 | 5807065 ~ 5807624 (-) |
| G2145335 | NA | other | downstream | 449613 | 5749686 ~ 5755666 (-) |
| G2145316 | opi-1 | other | downstream | 532589 | 5641476 ~ 5672690 (-) |
| G2146036 | NA | other | upstream | 415664 | 6649178 ~ 6649663 (-) |
| LOC110509586 | LOC106562956 | other | upstream | 1897269 | 8130783 ~ 8168089 (-) |
| ttc33 | LOC106568686 | other | upstream | 3131698 | 9365212 ~ 9437537 (-) |
| G2151189 | NA | other | upstream | 4484507 | 10718021 ~ 10799318 (-) |
