G2145918


Basic Information

Item Value
gene id G2145918
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 6848827 ~ 6849387 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2454207
ccaccgggcaacgaaggagtggcttcgtaagaagcatttcaaggtcctcgagtggcctagccagtctccagatctcaaccccatagaaaatctttggagggagttgaaagtccgtgttgcccagcaacagccccaaaacatcactgctctagaggagatctgcatggaggaacgggccaaaataccagcaacagtgtgtgaaaaccttgtgaagacttacagaaaacgtttgacctctgtcattgccaacaaaggatatataacaaagtattgagataaacttgttattgaccaaatacttattttccaccataatttgcaaataaattcattaaaaatcctacaatgtgattttctggatttttttcttctcatttcgtctgtcatagttgaagtgtacctatgatgaaaattacaggcctctctcatatttttaagtgggagaacttgcacaattggtggctgactaaacacttttttgccccactgtatatgaatgagtgatggtacagaacggcataggcctgttctgaaaggccccagtttgcaacaccattaagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2454207 True 561 lncRNA 0.42 1 6848827 6849387

Neighbor

gene id symbol gene type direction distance location
LOC110509567 LOC106562933 coding upstream 32227 6798103 ~ 6816600 (+)
LOC110509565 LOC105006106 coding upstream 91859 6726353 ~ 6756968 (+)
LOC118936374 NA coding upstream 177274 6667677 ~ 6673995 (+)
LOC110509307 LOC106562924 coding upstream 184556 6640782 ~ 6664348 (+)
LOC110509560 LOC106562923 coding upstream 226322 6599060 ~ 6622505 (+)
LOC110509572 LOC106562939 coding downstream 264401 7113788 ~ 7188400 (+)
LOC110509573 fcho2 coding downstream 342253 7191640 ~ 7288353 (+)
LOC110509577 btf3 coding downstream 665549 7514936 ~ 7521455 (+)
LOC110509575 arhgef28 coding downstream 675655 7525042 ~ 7636893 (+)
LOC110509581 hexb coding downstream 1058211 7907598 ~ 7917474 (+)
G2145917 NA non-coding upstream 200 6848327 ~ 6848627 (+)
G2145877 NA non-coding upstream 74264 6774317 ~ 6774563 (+)
G2145810 NA non-coding upstream 183857 6664661 ~ 6664970 (+)
G2145809 NA non-coding upstream 184267 6664357 ~ 6664560 (+)
G2145919 NA non-coding downstream 759 6850146 ~ 6850430 (+)
G2145931 NA non-coding downstream 15360 6864747 ~ 6864946 (+)
G2145932 NA non-coding downstream 15619 6865006 ~ 6865217 (+)
G2145936 NA non-coding downstream 22302 6871689 ~ 6871901 (+)
G2145965 NA non-coding downstream 56966 6906353 ~ 6906654 (+)
G2145733 NA other upstream 329687 6518690 ~ 6519140 (+)
LOC118945315 LOC106593246 other upstream 575334 6267751 ~ 6274178 (+)
G2145368 NA other upstream 616329 6188572 ~ 6232498 (+)
G2145472 LOC106591448 other upstream 654070 6187647 ~ 6194757 (+)
G2146821 NA other downstream 1150742 8000129 ~ 8000490 (+)
LOC118945282 NA other downstream 2108416 8957803 ~ 9032295 (+)
G2149183 NA other downstream 2524613 9374000 ~ 9374512 (+)
LOC110509604 LOC106562973 other downstream 3453301 10064167 ~ 10309768 (+)
G2150729 NA other downstream 3612366 10461753 ~ 10462220 (+)

Expression


Co-expression Network