Gene
RNA
| Item | Value |
|---|---|
| gene id | G2148253 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 8443032 ~ 8529631 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2456711 | True | 289 | lncRNA | 0.45 | 3 | 8443032 | 8529631 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509590 | LOC106562960 | coding | downstream | 210389 | 8224378 ~ 8232643 (-) |
| LOC110509589 | LOC106568849 | coding | downstream | 226187 | 8209282 ~ 8216845 (-) |
| LOC118945698 | NA | coding | downstream | 236558 | 8206343 ~ 8206474 (-) |
| LOC118945695 | NA | coding | downstream | 237930 | 8204971 ~ 8205102 (-) |
| LOC118945696 | NA | coding | downstream | 239984 | 8202919 ~ 8203048 (-) |
| LOC110509591 | LOC106562961 | coding | upstream | 88411 | 8618042 ~ 8682244 (-) |
| LOC110509310 | LOC106562962 | coding | upstream | 231472 | 8761103 ~ 8889487 (-) |
| LOC118945710 | NA | coding | upstream | 494164 | 9023795 ~ 9023922 (-) |
| LOC110509593 | LOC106562963 | coding | upstream | 498515 | 9028146 ~ 9130315 (-) |
| LOC110509595 | LOC106562965 | coding | upstream | 612358 | 9141989 ~ 9150865 (-) |
| G2148048 | NA | non-coding | downstream | 236468 | 8202769 ~ 8206564 (-) |
| G2148071 | NA | non-coding | downstream | 271130 | 8171685 ~ 8171902 (-) |
| LOC110509586 | LOC106562956 | non-coding | downstream | 307758 | 8130783 ~ 8168089 (-) |
| G2148055 | NA | non-coding | downstream | 317380 | 8125066 ~ 8125652 (-) |
| G2148352 | NA | non-coding | upstream | 54926 | 8584557 ~ 8584921 (-) |
| G2148371 | NA | non-coding | upstream | 82376 | 8612007 ~ 8612250 (-) |
| G2148626 | NA | non-coding | upstream | 336519 | 8866150 ~ 8867572 (-) |
| G2148651 | NA | non-coding | upstream | 366417 | 8896048 ~ 8896515 (-) |
| G2149023 | NA | non-coding | upstream | 627742 | 9157373 ~ 9157686 (-) |
| G2146036 | NA | other | downstream | 1793369 | 6649178 ~ 6649663 (-) |
| LOC110509559 | NA | other | downstream | 1848558 | 6579264 ~ 6594474 (-) |
| G2145542 | NA | other | downstream | 2190166 | 6137289 ~ 6252866 (-) |
| G2145618 | LOC106591448 | other | downstream | 2294538 | 6141066 ~ 6148494 (-) |
| ttc33 | LOC106568686 | other | upstream | 835581 | 9365212 ~ 9437537 (-) |
| G2151189 | NA | other | upstream | 2188390 | 10718021 ~ 10799318 (-) |
| ttll11 | LOC106562979 | other | upstream | 2421618 | 10923070 ~ 10969315 (-) |
| G2151771 | NA | other | upstream | 2463535 | 10993166 ~ 10993879 (-) |
| LOC100135966 | rps27a | other | upstream | 2712363 | 11241994 ~ 11244060 (-) |
