Gene
RNA
| Item | Value |
|---|---|
| gene id | G2148371 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 8612007 ~ 8612250 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2456834 | True | 244 | lncRNA | 0.40 | 1 | 8612007 | 8612250 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509590 | LOC106562960 | coding | downstream | 379364 | 8224378 ~ 8232643 (-) |
| LOC110509589 | LOC106568849 | coding | downstream | 395162 | 8209282 ~ 8216845 (-) |
| LOC118945698 | NA | coding | downstream | 405533 | 8206343 ~ 8206474 (-) |
| LOC118945695 | NA | coding | downstream | 406905 | 8204971 ~ 8205102 (-) |
| LOC118945696 | NA | coding | downstream | 408959 | 8202919 ~ 8203048 (-) |
| LOC110509591 | LOC106562961 | coding | upstream | 5792 | 8618042 ~ 8682244 (-) |
| LOC110509310 | LOC106562962 | coding | upstream | 148853 | 8761103 ~ 8889487 (-) |
| LOC118945710 | NA | coding | upstream | 411545 | 9023795 ~ 9023922 (-) |
| LOC110509593 | LOC106562963 | coding | upstream | 415896 | 9028146 ~ 9130315 (-) |
| LOC110509595 | LOC106562965 | coding | upstream | 529739 | 9141989 ~ 9150865 (-) |
| G2148352 | NA | non-coding | downstream | 27086 | 8584557 ~ 8584921 (-) |
| G2148253 | NA | non-coding | downstream | 82376 | 8443032 ~ 8529631 (-) |
| G2148247 | NA | non-coding | downstream | 147289 | 8433546 ~ 8464718 (-) |
| G2148048 | NA | non-coding | downstream | 405443 | 8202769 ~ 8206564 (-) |
| G2148626 | NA | non-coding | upstream | 253900 | 8866150 ~ 8867572 (-) |
| G2148651 | NA | non-coding | upstream | 283798 | 8896048 ~ 8896515 (-) |
| G2149023 | NA | non-coding | upstream | 545123 | 9157373 ~ 9157686 (-) |
| LOC110509597 | LOC106562968 | non-coding | upstream | 564907 | 9177157 ~ 9241546 (-) |
| G2149040 | NA | non-coding | upstream | 583506 | 9195756 ~ 9195974 (-) |
| LOC110509586 | LOC106562956 | other | downstream | 443976 | 8130783 ~ 8168089 (-) |
| G2146036 | NA | other | downstream | 1962344 | 6649178 ~ 6649663 (-) |
| LOC110509559 | NA | other | downstream | 2017533 | 6579264 ~ 6594474 (-) |
| G2145542 | NA | other | downstream | 2359141 | 6137289 ~ 6252866 (-) |
| G2145618 | LOC106591448 | other | downstream | 2463513 | 6141066 ~ 6148494 (-) |
| ttc33 | LOC106568686 | other | upstream | 752962 | 9365212 ~ 9437537 (-) |
| G2151189 | NA | other | upstream | 2105771 | 10718021 ~ 10799318 (-) |
| ttll11 | LOC106562979 | other | upstream | 2338999 | 10923070 ~ 10969315 (-) |
| G2151771 | NA | other | upstream | 2380916 | 10993166 ~ 10993879 (-) |
| LOC100135966 | rps27a | other | upstream | 2629744 | 11241994 ~ 11244060 (-) |
