G2147939


Basic Information

Item Value
gene id G2147939
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 8616631 ~ 8617227 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2456358
acatttacCTTTATTAAAATGGAGGTCATTGTACATTTTTGTCAATGAtcaacacaaaatactctgtaatgtgaaagtggaagaaaaaatcgtgaataaaaaaaagattaattaaaaataaaacacaaatacttggattacataattattcacccccccccccccccgagtaaatttatgttagaatcacctttggaagcgattacagctgtgcgtattcttgggtaaatctctaagagctttgcagacTGGGATTATTCAATATTTGCCCACTAttcttttctaaattcttcaagctctgtcaaggtgttcGGGATCATGTGTAGACAGCTATttccaagcagatttaagtcaaaactgtaacttggccactcaggaacattcactgtcttcttgtttAACAACTCCAATgtaaatttggccttgtgttgtaggttattatcctgctgaaaggcgaattcgtctcccagtgtctgtgtaAAGCAGATTGAAGCAAATTTCCCTtttggattttgcctgtgctaagcTCCACCCCAtgattttttatcctgaaaaacgcCTGTCTTTGCCAATATAAAgtatacccataccatgatg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2456358 True 597 lncRNA 0.37 1 8616631 8617227

Neighbor

gene id symbol gene type direction distance location
LOC110509587 fa69b coding upstream 415271 8173842 ~ 8201360 (+)
LOC110509309 LOC106562955 coding upstream 481318 8102932 ~ 8135313 (+)
LOC118945305 NA coding upstream 582709 8028448 ~ 8033922 (+)
LOC118945360 NA coding upstream 596050 8018456 ~ 8020581 (+)
LOC110509583 nsa2 coding upstream 683847 7928155 ~ 7932784 (+)
LOC118945282 NA coding downstream 407400 8957803 ~ 9032295 (+)
LOC110509594 rexo4 coding downstream 520064 9137291 ~ 9141371 (+)
LOC118945275 LOC107691784 coding downstream 592131 9209358 ~ 9209829 (+)
LOC110509598 pe2r4 coding downstream 743731 9309984 ~ 9366518 (+)
LOC110509604 LOC106562973 coding downstream 1446940 10064167 ~ 10309768 (+)
G2147654 NA non-coding upstream 409043 8205205 ~ 8207588 (+)
G2147598 NA non-coding upstream 445384 8136298 ~ 8171247 (+)
G2147622 NA non-coding upstream 455278 8148255 ~ 8161353 (+)
G2147579 NA non-coding upstream 561128 8055285 ~ 8055503 (+)
G2147934 NA non-coding downstream 17545 8634772 ~ 8636678 (+)
G2148509 LOC106562962 non-coding downstream 195358 8812585 ~ 8814382 (+)
G2148525 LOC106562962 non-coding downstream 217880 8835107 ~ 8837119 (+)
G2148551 NA non-coding downstream 256822 8874049 ~ 8874489 (+)
G2148834 NA non-coding downstream 533963 9151190 ~ 9151587 (+)
G2146821 NA other upstream 616141 8000129 ~ 8000490 (+)
LOC110509307 LOC106562924 other upstream 1958107 6640782 ~ 6664348 (+)
G2145733 NA other upstream 2097491 6518690 ~ 6519140 (+)
LOC118945315 LOC106593246 other upstream 2343138 6267751 ~ 6274178 (+)
G2145368 NA other upstream 2384133 6188572 ~ 6232498 (+)
G2149183 NA other downstream 756773 9374000 ~ 9374512 (+)
G2150729 NA other downstream 1844526 10461753 ~ 10462220 (+)
G2151555 NA other downstream 2743158 11359557 ~ 11432252 (+)

Expression


Co-expression Network