Gene
RNA
| Item | Value |
|---|---|
| gene id | G2148626 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 8866150 ~ 8867572 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2457119 | True | 218 | lncRNA | 0.35 | 2 | 8866150 | 8867572 |
8,862,000
8,862,400
8,862,800
8,863,200
8,863,600
8,864,000
8,864,400
8,864,800
8,865,200
8,865,600
8,866,000
8,866,400
8,866,800
8,867,200
8,867,600
8,868,000
8,868,400
8,868,800
NC_048593.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509591 | LOC106562961 | coding | downstream | 183906 | 8618042 ~ 8682244 (-) |
| LOC110509590 | LOC106562960 | coding | downstream | 633507 | 8224378 ~ 8232643 (-) |
| LOC110509589 | LOC106568849 | coding | downstream | 649305 | 8209282 ~ 8216845 (-) |
| LOC118945698 | NA | coding | downstream | 659676 | 8206343 ~ 8206474 (-) |
| LOC118945695 | NA | coding | downstream | 661048 | 8204971 ~ 8205102 (-) |
| LOC118945710 | NA | coding | upstream | 156223 | 9023795 ~ 9023922 (-) |
| LOC110509593 | LOC106562963 | coding | upstream | 160574 | 9028146 ~ 9130315 (-) |
| LOC110509595 | LOC106562965 | coding | upstream | 274417 | 9141989 ~ 9150865 (-) |
| ptcd2 | ptcd2 | coding | upstream | 298668 | 9166240 ~ 9170359 (-) |
| LOC110509597 | LOC106562968 | coding | upstream | 309597 | 9177157 ~ 9241546 (-) |
| G2148371 | NA | non-coding | downstream | 253900 | 8612007 ~ 8612250 (-) |
| G2148352 | NA | non-coding | downstream | 281229 | 8584557 ~ 8584921 (-) |
| G2148253 | NA | non-coding | downstream | 336519 | 8443032 ~ 8529631 (-) |
| G2148247 | NA | non-coding | downstream | 401432 | 8433546 ~ 8464718 (-) |
| G2148651 | NA | non-coding | upstream | 28476 | 8896048 ~ 8896515 (-) |
| G2149023 | NA | non-coding | upstream | 289801 | 9157373 ~ 9157686 (-) |
| G2149040 | NA | non-coding | upstream | 328184 | 9195756 ~ 9195974 (-) |
| G2149050 | NA | non-coding | upstream | 338800 | 9206372 ~ 9257290 (-) |
| LOC110509586 | LOC106562956 | other | downstream | 698119 | 8130783 ~ 8168089 (-) |
| G2146036 | NA | other | downstream | 2216487 | 6649178 ~ 6649663 (-) |
| LOC110509559 | NA | other | downstream | 2271676 | 6579264 ~ 6594474 (-) |
| G2145542 | NA | other | downstream | 2613284 | 6137289 ~ 6252866 (-) |
| G2145618 | LOC106591448 | other | downstream | 2717656 | 6141066 ~ 6148494 (-) |
| ttc33 | LOC106568686 | other | upstream | 497640 | 9365212 ~ 9437537 (-) |
| G2151189 | NA | other | upstream | 1850449 | 10718021 ~ 10799318 (-) |
| ttll11 | LOC106562979 | other | upstream | 2083677 | 10923070 ~ 10969315 (-) |
| G2151771 | NA | other | upstream | 2125594 | 10993166 ~ 10993879 (-) |
| LOC100135966 | rps27a | other | upstream | 2374422 | 11241994 ~ 11244060 (-) |
