G2148853


Basic Information

Item Value
gene id G2148853
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 9171682 ~ 9172034 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2457353
gtgaccagctcggaaaccgaattgcacagcggagaaggtacggtgggattctaaatggtcagtgatctgtttattaacttggctttcaaagacattagaaaggcagggcaggatggatataggtctgtaacagtttgggtctagagtgtcacctcctttgaagaggggggtgaccgcagcagctttccaatctttagggatctcggacaaaatgaaagagaggttgaacagactggtaataggggttgcaacaatggcggtggataattttagaaagagagggtccagattgtctagcccagatgATTTGTACggatccaggttttgcagctctttcagaacatctgcgatct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2457353 True 353 lncRNA 0.46 1 9171682 9172034

Neighbor

gene id symbol gene type direction distance location
LOC110509594 rexo4 coding upstream 30311 9137291 ~ 9141371 (+)
LOC118945282 NA coding upstream 141845 8957803 ~ 9032295 (+)
LOC110509587 fa69b coding upstream 970322 8173842 ~ 8201360 (+)
LOC110509309 LOC106562955 coding upstream 1036369 8102932 ~ 8135313 (+)
LOC118945305 NA coding upstream 1137760 8028448 ~ 8033922 (+)
LOC118945275 LOC107691784 coding downstream 37324 9209358 ~ 9209829 (+)
LOC110509598 pe2r4 coding downstream 188924 9309984 ~ 9366518 (+)
LOC110509604 LOC106562973 coding downstream 892133 10064167 ~ 10309768 (+)
zgc:63972 LOC106562974 coding downstream 1301398 10473432 ~ 10496533 (+)
si:dkeyp-72a4.1 LOC106562976 coding downstream 1434121 10606155 ~ 10618148 (+)
G2148851 NA non-coding upstream 895 9170474 ~ 9170787 (+)
G2148845 NA non-coding upstream 8676 9162271 ~ 9163006 (+)
G2148844 NA non-coding upstream 9679 9161710 ~ 9162003 (+)
G2148841 NA non-coding upstream 13408 9158047 ~ 9158274 (+)
G2148834 NA non-coding upstream 20095 9151190 ~ 9151587 (+)
G2148856 NA non-coding downstream 3976 9176010 ~ 9176223 (+)
G2148827 NA non-coding downstream 5136 9177170 ~ 9180489 (+)
G2148857 LOC106562968 non-coding downstream 8670 9180704 ~ 9180941 (+)
G2148870 NA non-coding downstream 29079 9201113 ~ 9201567 (+)
G2146821 NA other upstream 1171192 8000129 ~ 8000490 (+)
LOC110509307 LOC106562924 other upstream 2513158 6640782 ~ 6664348 (+)
G2145733 NA other upstream 2652542 6518690 ~ 6519140 (+)
LOC118945315 LOC106593246 other upstream 2898189 6267751 ~ 6274178 (+)
G2149183 NA other downstream 201966 9374000 ~ 9374512 (+)
G2150729 NA other downstream 1289719 10461753 ~ 10462220 (+)
G2151555 NA other downstream 2188351 11359557 ~ 11432252 (+)
G2152150 NA other downstream 2592190 11764224 ~ 11766351 (+)

Expression


Co-expression Network