Gene
RNA
| Item | Value |
|---|---|
| gene id | G2149242 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 9453654 ~ 9457539 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: 5'-AMP-activated protein kinase catalytic subunit alpha-1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2457784 | True | 450 | lncRNA | 0.50 | 3 | 9453654 | 9457539 |
9,448,000
9,449,000
9,450,000
9,451,000
9,452,000
9,453,000
9,454,000
9,454,000
9,455,000
9,456,000
9,457,000
9,458,000
9,459,000
9,460,000
NC_048593.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509598 | pe2r4 | coding | upstream | 87136 | 9309984 ~ 9366518 (+) |
| LOC118945275 | LOC107691784 | coding | upstream | 243825 | 9209358 ~ 9209829 (+) |
| LOC110509594 | rexo4 | coding | upstream | 312283 | 9137291 ~ 9141371 (+) |
| LOC118945282 | NA | coding | upstream | 423817 | 8957803 ~ 9032295 (+) |
| LOC110509587 | fa69b | coding | upstream | 1252294 | 8173842 ~ 8201360 (+) |
| LOC110509604 | LOC106562973 | coding | downstream | 606628 | 10064167 ~ 10309768 (+) |
| zgc:63972 | LOC106562974 | coding | downstream | 1015893 | 10473432 ~ 10496533 (+) |
| si:dkeyp-72a4.1 | LOC106562976 | coding | downstream | 1148616 | 10606155 ~ 10618148 (+) |
| LOC110509315 | LOC106562976 | coding | downstream | 1243515 | 10701054 ~ 10906165 (+) |
| LOC110509607 | LOC106562980 | coding | downstream | 1516903 | 10974442 ~ 11003230 (+) |
| G2148870 | NA | non-coding | upstream | 252087 | 9201113 ~ 9201567 (+) |
| G2148857 | LOC106562968 | non-coding | upstream | 272713 | 9180704 ~ 9180941 (+) |
| G2148827 | NA | non-coding | upstream | 273165 | 9177170 ~ 9180489 (+) |
| G2148856 | NA | non-coding | upstream | 277431 | 9176010 ~ 9176223 (+) |
| G2149334 | LOC106562972 | non-coding | downstream | 159874 | 9617413 ~ 9617782 (+) |
| G2149335 | NA | non-coding | downstream | 161098 | 9618637 ~ 9619279 (+) |
| G2149459 | NA | non-coding | downstream | 324726 | 9782265 ~ 9782604 (+) |
| G2150621 | NA | non-coding | downstream | 928986 | 10386525 ~ 10386756 (+) |
| G2150633 | NA | non-coding | downstream | 938319 | 10395858 ~ 10396068 (+) |
| G2149183 | NA | other | upstream | 79142 | 9374000 ~ 9374512 (+) |
| G2146821 | NA | other | upstream | 1453164 | 8000129 ~ 8000490 (+) |
| LOC110509307 | LOC106562924 | other | upstream | 2795130 | 6640782 ~ 6664348 (+) |
| G2145733 | NA | other | upstream | 2934514 | 6518690 ~ 6519140 (+) |
| G2150729 | NA | other | downstream | 1004214 | 10461753 ~ 10462220 (+) |
| G2151555 | NA | other | downstream | 1902846 | 11359557 ~ 11432252 (+) |
| G2152150 | NA | other | downstream | 2306685 | 11764224 ~ 11766351 (+) |
| G2152639 | NA | other | downstream | 2843253 | 12300792 ~ 12307438 (+) |
