Gene
RNA
| Item | Value |
|---|---|
| gene id | G2149628 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 9482741 ~ 9484781 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2458188 | True | 210 | lncRNA | 0.44 | 2 | 9482741 | 9484781 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100653467 | prkaa1 | coding | downstream | 25222 | 9444050 ~ 9457519 (-) |
| ttc33 | LOC106568686 | coding | downstream | 45298 | 9365212 ~ 9437537 (-) |
| LOC110509597 | LOC106562968 | coding | downstream | 241195 | 9177157 ~ 9241546 (-) |
| ptcd2 | ptcd2 | coding | downstream | 312382 | 9166240 ~ 9170359 (-) |
| LOC110509595 | LOC106562965 | coding | downstream | 331876 | 9141989 ~ 9150865 (-) |
| lamc3 | LOC106562972 | coding | upstream | 25586 | 9510367 ~ 9760908 (-) |
| LOC110509356 | NA | coding | upstream | 566423 | 10051204 ~ 10057769 (-) |
| ttll11 | LOC106562979 | coding | upstream | 1438289 | 10923070 ~ 10969315 (-) |
| LOC110509609 | LOC106562981 | coding | upstream | 1519309 | 11004090 ~ 11018061 (-) |
| ddx56 | ddx56 | coding | upstream | 1561536 | 11046317 ~ 11053829 (-) |
| G2149564 | NA | non-coding | downstream | 84174 | 9346387 ~ 9398567 (-) |
| G2149072 | NA | non-coding | downstream | 200409 | 9237804 ~ 9282332 (-) |
| G2149050 | NA | non-coding | downstream | 225451 | 9206372 ~ 9257290 (-) |
| G2149079 | LOC106578490 | non-coding | downstream | 231554 | 9250885 ~ 9251187 (-) |
| G2149040 | NA | non-coding | downstream | 286767 | 9195756 ~ 9195974 (-) |
| G2149707 | NA | non-coding | upstream | 105419 | 9590200 ~ 9591009 (-) |
| G2149729 | NA | non-coding | upstream | 133873 | 9618654 ~ 9619175 (-) |
| G2150466 | NA | non-coding | upstream | 693392 | 10178173 ~ 10178671 (-) |
| G2150605 | NA | non-coding | upstream | 892979 | 10377760 ~ 10378011 (-) |
| G2150622 | NA | non-coding | upstream | 901739 | 10386520 ~ 10386722 (-) |
| LOC110509586 | LOC106562956 | other | downstream | 1314710 | 8130783 ~ 8168089 (-) |
| G2146036 | NA | other | downstream | 2833078 | 6649178 ~ 6649663 (-) |
| LOC110509559 | NA | other | downstream | 2888267 | 6579264 ~ 6594474 (-) |
| G2145542 | NA | other | downstream | 3229875 | 6137289 ~ 6252866 (-) |
| G2151189 | NA | other | upstream | 1233240 | 10718021 ~ 10799318 (-) |
| G2151771 | NA | other | upstream | 1508385 | 10993166 ~ 10993879 (-) |
| LOC100135966 | rps27a | other | upstream | 1757213 | 11241994 ~ 11244060 (-) |
| LOC110509625 | LOC106568355 | other | upstream | 1971837 | 11456618 ~ 11525214 (-) |
