Gene
RNA
| Item | Value |
|---|---|
| gene id | G2150622 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 10386520 ~ 10386722 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2459226 | True | 203 | lncRNA | 0.39 | 1 | 10386520 | 10386722 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509356 | NA | coding | downstream | 328751 | 10051204 ~ 10057769 (-) |
| lamc3 | LOC106562972 | coding | downstream | 625612 | 9510367 ~ 9760908 (-) |
| aif1l | LOC106562971 | coding | downstream | 885101 | 9461338 ~ 9501419 (-) |
| LOC100653467 | prkaa1 | coding | downstream | 929001 | 9444050 ~ 9457519 (-) |
| ttc33 | LOC106568686 | coding | downstream | 949077 | 9365212 ~ 9437537 (-) |
| ttll11 | LOC106562979 | coding | upstream | 536348 | 10923070 ~ 10969315 (-) |
| LOC110509609 | LOC106562981 | coding | upstream | 617368 | 11004090 ~ 11018061 (-) |
| ddx56 | ddx56 | coding | upstream | 659595 | 11046317 ~ 11053829 (-) |
| LOC110509316 | LOC106563014 | coding | upstream | 752700 | 11139422 ~ 11159002 (-) |
| LOC118945308 | NA | coding | upstream | 803848 | 11190570 ~ 11193499 (-) |
| G2150605 | NA | non-coding | downstream | 8509 | 10377760 ~ 10378011 (-) |
| G2150466 | NA | non-coding | downstream | 207849 | 10178173 ~ 10178671 (-) |
| G2149729 | NA | non-coding | downstream | 767345 | 9618654 ~ 9619175 (-) |
| G2149707 | NA | non-coding | downstream | 795511 | 9590200 ~ 9591009 (-) |
| G2149628 | NA | non-coding | downstream | 901739 | 9482741 ~ 9484781 (-) |
| G2150636 | NA | non-coding | upstream | 12224 | 10398946 ~ 10399207 (-) |
| G2150659 | NA | non-coding | upstream | 28880 | 10415602 ~ 10415960 (-) |
| G2150660 | NA | non-coding | upstream | 29965 | 10416687 ~ 10416894 (-) |
| G2150665 | NA | non-coding | upstream | 34253 | 10420975 ~ 10421186 (-) |
| G2150668 | NA | non-coding | upstream | 35760 | 10422482 ~ 10422792 (-) |
| LOC110509586 | LOC106562956 | other | downstream | 2218489 | 8130783 ~ 8168089 (-) |
| G2146036 | NA | other | downstream | 3736857 | 6649178 ~ 6649663 (-) |
| LOC110509559 | NA | other | downstream | 3792046 | 6579264 ~ 6594474 (-) |
| G2145542 | NA | other | downstream | 4133654 | 6137289 ~ 6252866 (-) |
| G2151189 | NA | other | upstream | 331299 | 10718021 ~ 10799318 (-) |
| G2151771 | NA | other | upstream | 606444 | 10993166 ~ 10993879 (-) |
| LOC100135966 | rps27a | other | upstream | 855272 | 11241994 ~ 11244060 (-) |
| LOC110509625 | LOC106568355 | other | upstream | 1069896 | 11456618 ~ 11525214 (-) |
