G2150683


Basic Information

Item Value
gene id G2150683
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 10430228 ~ 10430534 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2459287
acccacaactgtaaggctctccagacggtagtgaggtctgcacaacgcatcaccgggggcaaactacctgccctccaggacacctacaccacccaatgtcacaggaaggccataaagatcatcaaggacaacaaccacccaagccactgcctgttcacccgctatcatccaagaaggcgaggtcagtacaggtgcatcaaagcagggacagagagactgaaaaacagcttctatctcaaggccatcagactatgaAACAGCCACCActgacattgagtggctgctgccaacatactgactcaactcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2459287 True 307 lncRNA 0.52 1 10430228 10430534

Neighbor

gene id symbol gene type direction distance location
LOC110509604 LOC106562973 coding upstream 120460 10064167 ~ 10309768 (+)
LOC110509598 pe2r4 coding upstream 1063710 9309984 ~ 9366518 (+)
LOC118945275 LOC107691784 coding upstream 1220399 9209358 ~ 9209829 (+)
LOC110509594 rexo4 coding upstream 1288857 9137291 ~ 9141371 (+)
LOC118945282 NA coding upstream 1400391 8957803 ~ 9032295 (+)
zgc:63972 LOC106562974 coding downstream 42898 10473432 ~ 10496533 (+)
si:dkeyp-72a4.1 LOC106562976 coding downstream 175621 10606155 ~ 10618148 (+)
LOC110509315 LOC106562976 coding downstream 270520 10701054 ~ 10906165 (+)
LOC110509607 LOC106562980 coding downstream 543908 10974442 ~ 11003230 (+)
LOC110509610 LOC106562982 coding downstream 590536 11021070 ~ 11022671 (+)
G2150667 NA non-coding upstream 7458 10422474 ~ 10422770 (+)
G2150653 NA non-coding upstream 18530 10410980 ~ 10411698 (+)
G2150639 NA non-coding upstream 28955 10401056 ~ 10401273 (+)
G2150635 NA non-coding upstream 31047 10398923 ~ 10399181 (+)
G2150633 NA non-coding upstream 34160 10395858 ~ 10396068 (+)
G2150699 NA non-coding downstream 7911 10438445 ~ 10438761 (+)
G2150717 NA non-coding downstream 72137 10502671 ~ 10503922 (+)
G2150903 NA non-coding downstream 222393 10652927 ~ 10653402 (+)
G2150904 LOC106597055 non-coding downstream 224529 10655063 ~ 10655524 (+)
G2150910 NA non-coding downstream 246504 10677038 ~ 10677816 (+)
G2149183 NA other upstream 1055716 9374000 ~ 9374512 (+)
G2146821 NA other upstream 2429738 8000129 ~ 8000490 (+)
LOC110509307 LOC106562924 other upstream 3771704 6640782 ~ 6664348 (+)
G2150729 NA other downstream 31219 10461753 ~ 10462220 (+)
G2151555 NA other downstream 929851 11359557 ~ 11432252 (+)
G2152150 NA other downstream 1333690 11764224 ~ 11766351 (+)
G2152639 NA other downstream 1870258 12300792 ~ 12307438 (+)
G2153316 NA other downstream 2329346 12759880 ~ 12760490 (+)

Expression


Co-expression Network