G2150904 (LOC106597055)


Basic Information

Item Value
gene id G2150904
gene name LOC106597055
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 10655063 ~ 10655524 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2459535
ctagtagagctgtgttgtgatgggccgggtctagtagagctgtgttgtgaagggccgggtctagtagagctttgttgtgatgggccaggtctagtagagctgtgttgtgaagggccgggtctagtagagctttgttgggatgggctgggtctagtagagctgtgttgtgaagggccgggtctagtagagctgtgttgtgatgggccaggtcttgtagagctgtgctgtgttgggcctggtctagtagagctgtgctgtaataagccatgtctggctcttttctcctcgggatggtggaggtactgttgtttcagaaggtggggcgggggacctttgttgctggggtgatgggtgtgtgggtccctgccaagtgttgcatcttttaggtccttggcaaaggttctgatactgtcctgatcaagatgtatattatcatataagtgttgacatgtcagagtgggg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106597055, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2459535 True 462 lncRNA 0.52 1 10655063 10655524

Neighbor

gene id symbol gene type direction distance location
si:dkeyp-72a4.1 LOC106562976 coding upstream 36915 10606155 ~ 10618148 (+)
zgc:63972 LOC106562974 coding upstream 158530 10473432 ~ 10496533 (+)
LOC110509604 LOC106562973 coding upstream 345295 10064167 ~ 10309768 (+)
LOC110509598 pe2r4 coding upstream 1288545 9309984 ~ 9366518 (+)
LOC118945275 LOC107691784 coding upstream 1445234 9209358 ~ 9209829 (+)
LOC110509315 LOC106562976 coding downstream 45530 10701054 ~ 10906165 (+)
LOC110509607 LOC106562980 coding downstream 318918 10974442 ~ 11003230 (+)
LOC110509610 LOC106562982 coding downstream 365546 11021070 ~ 11022671 (+)
LOC110509611 LOC106562983 coding downstream 370225 11025749 ~ 11044674 (+)
LOC100136324 sr-bi coding downstream 420941 11076465 ~ 11112463 (+)
G2150903 NA non-coding upstream 1661 10652927 ~ 10653402 (+)
G2150717 NA non-coding upstream 151141 10502671 ~ 10503922 (+)
G2150699 NA non-coding upstream 216302 10438445 ~ 10438761 (+)
G2150683 NA non-coding upstream 224529 10430228 ~ 10430534 (+)
G2150667 NA non-coding upstream 232293 10422474 ~ 10422770 (+)
G2150910 NA non-coding downstream 21514 10677038 ~ 10677816 (+)
G2150914 NA non-coding downstream 26286 10681810 ~ 10682144 (+)
G2150918 NA non-coding downstream 36736 10692260 ~ 10692464 (+)
G2150924 NA non-coding downstream 43820 10699344 ~ 10699589 (+)
G2150939 NA non-coding downstream 59364 10714888 ~ 10715168 (+)
G2150729 NA other upstream 192843 10461753 ~ 10462220 (+)
G2149183 NA other upstream 1280551 9374000 ~ 9374512 (+)
LOC118945282 NA other upstream 1622768 8957803 ~ 9032295 (+)
G2146821 NA other upstream 2654573 8000129 ~ 8000490 (+)
G2151555 NA other downstream 704861 11359557 ~ 11432252 (+)
G2152150 NA other downstream 1108700 11764224 ~ 11766351 (+)
G2152639 NA other downstream 1645268 12300792 ~ 12307438 (+)
G2153316 NA other downstream 2104356 12759880 ~ 12760490 (+)
G2154294 NA other downstream 3012765 13668289 ~ 13669170 (+)

Expression


Co-expression Network