G2151189


Basic Information

Item Value
gene id G2151189
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 10718021 ~ 10799318 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2459830
tcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtgaagaagtttaaagccggatttggataacaaaaatatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctaccaagacctggccttccctctaaactttcagctcatacaaggagaagactgatcagagatgcagccaagaggcccatgatcactctggatgaactgcagagatctacagctgaggtgggagactctgtccatagaacaacaatcgtcgtatattgcacaaatctggcctttatggaagagtggcaagaagaaagccatttcttaaagatatccataaaaagtgtcgtttaaagtttgccacaagccacctgggagacacgccaaacatgtggaagaaggtgctctggtcagatgaaaccaaattgaactttttggcaacaatgcaaaacgttatgtttggcgtaaaagcaacacagctgaacacaccatccccactgtcaaacatggtggtggcagcatcatggtttgggcctgcttttcttcagcagggacagggaagatggttcaaattgatgggaagatggatggagccaaatacaggaccattctggaagaaaacctgatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaatgatccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagttcagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctgcatccaacttcactgagctcgagctgttttgcaaggaggaatggtaaaaaatgtcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaagggggctgaataattttgcacgcccaatttttcag

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2459830 True 1052 TUCP 0.43 2 10718021 10799318

Neighbor

gene id symbol gene type direction distance location
LOC110509356 NA coding downstream 660252 10051204 ~ 10057769 (-)
lamc3 LOC106562972 coding downstream 957113 9510367 ~ 9760908 (-)
aif1l LOC106562971 coding downstream 1216602 9461338 ~ 9501419 (-)
LOC100653467 prkaa1 coding downstream 1260502 9444050 ~ 9457519 (-)
ttc33 LOC106568686 coding downstream 1280578 9365212 ~ 9437537 (-)
ttll11 LOC106562979 coding upstream 123752 10923070 ~ 10969315 (-)
LOC110509609 LOC106562981 coding upstream 204772 11004090 ~ 11018061 (-)
ddx56 ddx56 coding upstream 246999 11046317 ~ 11053829 (-)
LOC110509316 LOC106563014 coding upstream 340104 11139422 ~ 11159002 (-)
LOC118945308 NA coding upstream 391252 11190570 ~ 11193499 (-)
G2151187 NA non-coding downstream 2913 10714882 ~ 10715108 (-)
G2151185 NA non-coding downstream 4066 10713756 ~ 10713955 (-)
G2151176 NA non-coding downstream 12968 10704852 ~ 10705053 (-)
G2151172 NA non-coding downstream 15821 10701992 ~ 10702200 (-)
G2151171 NA non-coding downstream 16680 10700998 ~ 10701341 (-)
G2151295 NA non-coding upstream 106001 10905319 ~ 10911707 (-)
G2151296 NA non-coding upstream 112463 10911781 ~ 10912062 (-)
G2151734 NA non-coding upstream 130594 10929912 ~ 10930188 (-)
G2151738 NA non-coding upstream 134033 10933351 ~ 10933571 (-)
LOC110509586 LOC106562956 other downstream 2549990 8130783 ~ 8168089 (-)
G2146036 NA other downstream 4068358 6649178 ~ 6649663 (-)
LOC110509559 NA other downstream 4123547 6579264 ~ 6594474 (-)
G2145542 NA other downstream 4465155 6137289 ~ 6252866 (-)
G2151771 NA other upstream 193848 10993166 ~ 10993879 (-)
LOC100135966 rps27a other upstream 442676 11241994 ~ 11244060 (-)
LOC110509625 LOC106568355 other upstream 657300 11456618 ~ 11525214 (-)
G2152107 NA other upstream 922754 11722072 ~ 11722479 (-)

Expression


Co-expression Network