G2151295


Basic Information

Item Value
gene id G2151295
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 10905319 ~ 10911707 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2459946
TTGCAAATGTACATAAATTGCACAGCCAcattgtttttatatatatatcgtCAACACAAACAAATTCCTCTGTACATTATTGTTTTTGTCACTGTTGTCCAAAGGAAGCAGAATCCAGCCAATACTTTACTTTCAACATCATTACAAAAGCATTTTCTACAAGATATTAGAAAACATACATCTTTTACTTTATTTATAGATATATATTTAATTTATagtattttttttctccactGGCTGTAACTGCACTGTATGTActatataattgtgtgtgtgtgtgtggctacatTGACATCATCATcacatttctctctctgactctcatctCCTACATTCTTTAACAACTTAACGAAGGTGGAACGGCGGAGGGACGTGACCAGAAACAGACAAGAGGGTTTAGAATTGATTGCCAAATGAAGGACATTGCATTGCCAATTTCTATGGAAGTGGCATTATGCTATGTGGCACTGGTAACACAAATTGATAATGACAGTTTATACCAGTATTAAACTAGCTGATTTGGGAGAGTTGGCATtttccatttcctgtttcagtttAGAGGTACAGAGGACTAGAGAGAACACATCCCTAAAGACGGAAGTCTTGACCTCATCTAGTCCTCTCTACAACAGTCAGTAATGTCTTTTCCCCTCAAAATGCTGGACATAAAATACACAATTGAAGTAAATTGAGTGAGCAAATTTATATGAGTATTGCACTCAGTAGTACACTCCACGACATGGCTGATCAAGCCAGGAGTGCACACGTCTGCAGTCCAAAAGACAGGGGTGTGTTTATGGAACGTAGACTAGGGGCTGGAGTCAATCCGTGTCGCGGAAGATCCACGTTAAAATGTCTAGATCATTTCCAATTGCGCTGACATGTGCAGCGTTTACGGGTAAATGCAGTTTCCGCGAATGTGCCACGCTCCGCGTTACATTCGAGCAACCCCATTGACTGAAACTCATCCCTGTATGTTAACTTCGTGGACTATGAGAAAGCATTTGACAGCTTAGACAGAGACGCCCTATGGAGGCTCCTCAGACCAGGGAAGCTTGCCAGAATGATCTGCACTACCTATAATGGCATAACATGCAGGGTTGTGCATGCAGGCAAGCTTAACTCACCCTTCAGACTCCTGACTAGAGAAAAACAGGATGTCTCCTGTCACCCTTCCTTTTCCTGTTAGACATTGACTGGGTCATGAGGAAGACAACCGAGAACAGGTGACATGGCATACAATGGTCTCTATGGACACAGTTGGACGACCTCAACTTTGCGGAGGATCTAGCACTCCTGTCGCACAGTCAACAGCAAATGCAATATAAAACGTCAGACCTGGACACCACATCATCCCAGCCAAGACTCCATATCCACAGAAAACAAAACCAAGATAACGATCAACGACGAATCTAACAATCCAATCACCCTCAGAAGAAGAACCCCTGGAGGATGCCAGTTCCTTCACCGATCTGTGATGCGTCATCACCAAACAAGGCGAAACCGAGCAGGATGTAAAGGCAGAATTCAAAAAGCAAGAGTAGCCTTCATCTCCCAAAGAAACAAGAGTAGCCTTCATCTCCCATCTGGAGCTCCAGGAAAATGAAAACGCAAACCCTTTCAACACCAATGTTAAGTCAGTGATGGCTGTATGGCTCAGACAAATGGAGGACAATGTCTTCCATTtgtccgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtatgaagggctatataaataaatttgatttgacaacaaAACCCACAATGACAACAACTCAGAGCTTCATAAACAAGGGCCTGCGACGCAATCCTTCACATCAGATGGATGGGCAGAGTCCGTAGCATTGACCCGTGGGAGCGCATCAGCCAGGTTCCGGTGGAAGAGGAGATCCGGAGGAGAAGATGGGGATGGATCGGCCACACCCTCCGAAAGTTCCCCTCCAACATCACCAGGCAAGCGCTATACTAGAACCCACAAGGGAGCTCCCGAAGGAACGTAAGTAAGTCTCTGCGAACGTCGGGAACATTGCCTTTGAATTTAAATCCGATACGGTTTGGATCCAGCTCTATCAATGCTTAAAACCTCCATTGTAAAAGTGCAGAGCTGGGCTGATGACAAATGGGgttttgtgcttgtgtttctctctcaccaCACCTGATTGGGTCATAGGTCGCTGGACATTTGGACTCTCTCTGACCTCTACACGCCAGACATCATCCAAAACCTCTCAGAGTCAACATagtcatttacatttttttgcaaTATACTCTTGAAGTGTTTTTTCCTTGATAAAAAAAGAGTATATTgaatgcggggggggggggggggggggggggggaattagaGGATTGCACTAAAACCTGGAGATCTAGCTGAACAGGACAGATGGCTGGTTGAGCTATTTACAATATCCATGATGTCATATCAATCGATACAGCAGTATTATTGAACACAAGGTACATTTACAAAAAAAGGCTCTCTTTTTAACATTAGTTAAAAATATTGTGAACATTTTATCTACACTCTCGTCTCCAAGGCTGTCCAGCCTCTTGATACACTCATCATTATCATATATTTATATGATATATAAATCACATATCATTCATGTCTGCAGCAACTCATAAAAACAACATTCCATCATCTTCCTATATTGAAAACATattcttttacattttttttgaaaTGGTGACGCAGTGGGTCGCTACCATTCCTTACGGCGCCAAAATGAAGCATGCAGATTTTTCAACCCTAACTCATCTGTAAAGGTAAGAAAAATGAATtacaaaaatatacaaaatatagaTGTGCTGAAAATGTCTGTGGGGTGGTGGGAGCAAGCGGGAACAGTAGCTATAGGATCATTCAGGGACAATAGGTCTAGACCCCACATTAGGGTCTAGACCCCACATTAAGACCAACCGTGTGTTTGAGTAGCATCTTCACATTCaatagagagagggaatgagggagaaggggagagggaaaaaagaggagaggagagagagatgcctCGAAGCGAAGTGGGGGGGTCACAGTCTTTATGCGGCATGCTTCTTTGACATGAATTAGCAAACAGGAGAGTTTTAAGAAAAAGCGTACGATTCTAACCTGTGAGGTCACAttataacacacaccagtccagtGTATAGTATAACATCGTGTTCAACAACGcaactctctctccccttgtgcTACAGGGCTATCCGACCAGCCATGGCTCCTGAACACGAAGCGACACACAACCAACATACGCCGTCGTTTCAACGTCGATTCAACATTATTGGTGAAGCACTAAAGCAAACCTCAATCCCGACCGGGTCTATTTCCAAAAACCTGGATAAAGTACAggtcaagaagaagaagaagaagaaaggaaaCAGGATATGTATTTCATCTGCTTATGGTGCAACTCACAGCATAGTGTGCAGTCTCTCCCTGCCCCGAAGCCCTATAAGACACACTATAGCTGCAACCACACACTCCTTGGAACGGGCTTCTTTCGTACTCGACCTGAtcaaatatatctatatatatcatGTATACTTTACAGAGGGAAAAATGAAATATGCATACATCTATCTTACATTAGTATATTTTCACATACAGGTCATGATTTAGTGTTCATAACACATTTTGCGTGATGTATTTGtacaatatatttatattccTTTACAAATCTACTGTATCATAAGACGtgccttttgttgttgttgttgcaggaatAGGGGGTCTGAAGGACAAAGTAGAGATGTGTTCCTTACTTAAGGCGTTTCATGTACCAATAGCTTTCacacagtgcactatatagggagaggaggaaaaagcGGAAGTGTTTCGGCCCTCCAGGACTGACACTGAACAGCCCGGGGTTAGGGCAGGAGTAGGCAGGTCGATTCTGCTGCGGGACTATTGTTGTCAGAGTGGATGGTTGGGGACCGGAACATTGCTATGatcatttgtacactgcaaattgacaaCAGCCCAAAAgaagattgtatttgaaaataataatacatttcaaTACCTTGATTACACTGAGACAcggtcacatacagtgccttcgctGAGTATTTACACCTCTTCActtttttttcaacattttgtaacgttacaaccttattctaaaattgattaaatagtcccccccccccctcatcaatctacacacaataccccataatgacaaagcaaaaacaggtgtttagaaatgtttgctaataaaaattaaatatcacatttacataagtattcataacctttactttgttgaagcacctttggcagcgattacagcatcgagtgtccttgggtatgacgctgcaagcttggcacacctgtatttgggcagtttctcgcattcttctctgcagatcctctcaagctttgtcaggttggatggggagcgtcgctgcactgctattttcaggtctccccagagatgtttgatcgggttcaagtccggactttggctgggccactcaaggacattcagagacttgtcccgaagccactcctgcgttttcttggctgtgtgcttagggtcatggtcctgttggagggtgaacctttgccccagtctgtcctgagcgctctggagaggatcaaggatctctctctactttgcctCTTTGCCACCAACATTCTTCTCCAtccggatggtgccaggtttcctccagacgtggcgcttggcattaaggccaaagagttcaatcttggtttcatcagaccagagaatcttgtttctcatggtcgggggtctttaggtgccttttggcaaactccaagcaggctgtcatgtgccttttactgaggagtgtcttccatctggccactctaccataaaggcctgattggtggagtgctgcagagatggttgtccttctggtgggttattccatctccacagaattctggagctctgccagagtgaccaccgggttcttggtcacctccctgaccaaggcccttctcccccgattgctcagtttggccgggcggccagagtcttggtggttccacatttcttccatttaagaatggtgaAGGCCGCTGTGTTCCtgggggccttcaatgctgcagaatttttttgttacctttccccagatctgtgccaggACACAATCCTGTGTCGGGGGTCTACGAACAATTACTTTGACATCATTGCTtgttttttgttctgacatgcactgtcaactgtgggacctgataTAGTCAAgagtgtgtgcctttctaaatcatgtccaatcaatttcaaagataatcaatggaaaccggatgcacctgagctcaattttgagtctcatagcaaagggtctgaatacttaggtatttctgtttttatattttaatacatttgcaaacatttctaaaaacctgttttcaatttgtcattgtgggatattgtgtgctcaggattttttttaaagtctgtaacgtaacgtggaaaaagtcaaggggtctgaatactttgcgaaggCACTGCATGTCTCTTTTTTTTATTCTTGGGAATATTtaggaacagatttcctaaattaaacaaATCTTTTGCTGAATTCATAGTGATTTTACAGTCTTTTTGACCATAAACTAAAATTCCCTCAACAAGTATTATTATTGTTCGGGGTTGTATTATTATTGTTCGGGGTTGTATTATTATTGTTCTGTTTTGTACACGGTCCACATGACCTGGTCGtaacagagaagagaggagaagagaggaggtcaggaaaggagaggaaacagaggagaggggaagagagaggattgGGTGActatctgacagacagacattgtgTTCATTATAATGATTTGTCCAAAGCTTTAGGGAAGAGTCCGAAATTGTCCCAGCAACTGCATACATCCAATGGAAACATCCAAATCGGTTGATTAATGGAGAGTTCAGTTCATATCTACAGCTTGTCCCGCCTCCTCCTCTGCAGGGCCCACTGGTATTCAGCTCTGTCCATTGATTCGCTGTCACTGACTTGGTCAGCTGTCTGTCAAACTGAAGTCCCGCCGCCTCGCTGCTTGGCCCCTCACAGTGGTCTCCTCACTTAGACTAACCCCCGTTTAGTGTCCATATAAGGAAGTGTCCTTTACAAGCaccagccaacacacacacacacacatccactctCTATCAGACTCTCTCTAGCAGTTGCTGCTGTTCCTGAACTCTCCGTTCTCAGTGATCTGGAGCTTGGTGGGATTGGTCGGGGATATGCCGTTACGGGTCTGCATGCTGTAGCGCTCCTTCAGCTGGGTCAGGGCACTCATCAGACGGGCGTTGGCTGCGTCAAGAGACGCGATACGCTt

Function

NR:

description
PREDICTED: zinc finger protein 135-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2459946 True 6368 lncRNA 0.44 2 10905319 10911707

Neighbor

gene id symbol gene type direction distance location
LOC110509356 NA coding downstream 847550 10051204 ~ 10057769 (-)
lamc3 LOC106562972 coding downstream 1144411 9510367 ~ 9760908 (-)
aif1l LOC106562971 coding downstream 1403900 9461338 ~ 9501419 (-)
LOC100653467 prkaa1 coding downstream 1447800 9444050 ~ 9457519 (-)
ttc33 LOC106568686 coding downstream 1467876 9365212 ~ 9437537 (-)
ttll11 LOC106562979 coding upstream 11363 10923070 ~ 10969315 (-)
LOC110509609 LOC106562981 coding upstream 92383 11004090 ~ 11018061 (-)
ddx56 ddx56 coding upstream 134610 11046317 ~ 11053829 (-)
LOC110509316 LOC106563014 coding upstream 227715 11139422 ~ 11159002 (-)
LOC118945308 NA coding upstream 278863 11190570 ~ 11193499 (-)
G2151187 NA non-coding downstream 190211 10714882 ~ 10715108 (-)
G2151185 NA non-coding downstream 191364 10713756 ~ 10713955 (-)
G2151176 NA non-coding downstream 200266 10704852 ~ 10705053 (-)
G2151172 NA non-coding downstream 203119 10701992 ~ 10702200 (-)
G2151171 NA non-coding downstream 203978 10700998 ~ 10701341 (-)
G2151296 NA non-coding upstream 74 10911781 ~ 10912062 (-)
G2151734 NA non-coding upstream 18205 10929912 ~ 10930188 (-)
G2151738 NA non-coding upstream 21644 10933351 ~ 10933571 (-)
G2151740 NA non-coding upstream 22873 10934580 ~ 10934793 (-)
G2151189 NA other downstream 106001 10718021 ~ 10799318 (-)
LOC110509586 LOC106562956 other downstream 2737288 8130783 ~ 8168089 (-)
G2146036 NA other downstream 4255656 6649178 ~ 6649663 (-)
LOC110509559 NA other downstream 4310845 6579264 ~ 6594474 (-)
G2151771 NA other upstream 81459 10993166 ~ 10993879 (-)
LOC100135966 rps27a other upstream 330287 11241994 ~ 11244060 (-)
LOC110509625 LOC106568355 other upstream 544911 11456618 ~ 11525214 (-)
G2152107 NA other upstream 810365 11722072 ~ 11722479 (-)

Expression


Co-expression Network