Gene
RNA
| Item | Value |
|---|---|
| gene id | G2151766 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 10987282 ~ 10987514 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2460467 | True | 233 | lncRNA | 0.39 | 1 | 10987282 | 10987514 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ttll11 | LOC106562979 | coding | downstream | 17967 | 10923070 ~ 10969315 (-) |
| LOC110509356 | NA | coding | downstream | 929513 | 10051204 ~ 10057769 (-) |
| lamc3 | LOC106562972 | coding | downstream | 1226374 | 9510367 ~ 9760908 (-) |
| aif1l | LOC106562971 | coding | downstream | 1485863 | 9461338 ~ 9501419 (-) |
| LOC100653467 | prkaa1 | coding | downstream | 1529763 | 9444050 ~ 9457519 (-) |
| LOC110509609 | LOC106562981 | coding | upstream | 16576 | 11004090 ~ 11018061 (-) |
| ddx56 | ddx56 | coding | upstream | 58803 | 11046317 ~ 11053829 (-) |
| LOC110509316 | LOC106563014 | coding | upstream | 151908 | 11139422 ~ 11159002 (-) |
| LOC118945308 | NA | coding | upstream | 203056 | 11190570 ~ 11193499 (-) |
| LOC110509613 | LOC106562989 | coding | upstream | 227964 | 11215478 ~ 11218956 (-) |
| G2151742 | NA | non-coding | downstream | 49400 | 10937571 ~ 10937882 (-) |
| G2151741 | NA | non-coding | downstream | 51591 | 10935461 ~ 10935691 (-) |
| G2151740 | NA | non-coding | downstream | 52489 | 10934580 ~ 10934793 (-) |
| G2151738 | NA | non-coding | downstream | 53711 | 10933351 ~ 10933571 (-) |
| G2151734 | NA | non-coding | downstream | 57094 | 10929912 ~ 10930188 (-) |
| G2151773 | NA | non-coding | upstream | 7348 | 10994862 ~ 10995067 (-) |
| G2151776 | LOC106562980 | non-coding | upstream | 13534 | 11001048 ~ 11002027 (-) |
| G2151821 | NA | non-coding | upstream | 121248 | 11108762 ~ 11112463 (-) |
| G2151827 | NA | non-coding | upstream | 126520 | 11114034 ~ 11114383 (-) |
| G2151835 | NA | non-coding | upstream | 136212 | 11123726 ~ 11123978 (-) |
| G2151189 | NA | other | downstream | 187964 | 10718021 ~ 10799318 (-) |
| ttc33 | LOC106568686 | other | downstream | 1549745 | 9365212 ~ 9437537 (-) |
| LOC110509586 | LOC106562956 | other | downstream | 2819251 | 8130783 ~ 8168089 (-) |
| G2146036 | NA | other | downstream | 4337619 | 6649178 ~ 6649663 (-) |
| G2151771 | NA | other | upstream | 5652 | 10993166 ~ 10993879 (-) |
| LOC100135966 | rps27a | other | upstream | 254480 | 11241994 ~ 11244060 (-) |
| LOC110509625 | LOC106568355 | other | upstream | 469104 | 11456618 ~ 11525214 (-) |
| G2152107 | NA | other | upstream | 734558 | 11722072 ~ 11722479 (-) |
| atg10 | atg10 | other | upstream | 953948 | 11940630 ~ 11945825 (-) |
