G2151341


Basic Information

Item Value
gene id G2151341
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 11003261 ~ 11005434 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2459994
TATTAAAACCAGTatgaatgtaaaacaaaataacatcgtaaaaaaaaaagacaaaaaaaagaccAAACTACTTGGTAAAACAATTAGATTTTACATCTACGAGACCAGCTAGCagctacactacatggccaaaagtatatatagtattttaCGACAAATAACAGAACACAGGCAACTGAATCTGTTCATTTGAAGATAGAATGTCTGTCAATAAGACTACCTGGGGTGCTGACAAACGTTAGATATTTTAAATTGAAACTTAGTTGGGTCAAAACAATCTACAGATTTGTTCCTTCCTTTTGAGGGACATTTCACAATTTTAACTTCATGTTAAAATTCGTgttatgttttgtagtaaaagaggaaaataagtgtttccaattagtaggcaatgcctaCTCGTAATTGGTTAAAAATCACATGATGCACACCGATGATGTCATTAGAAACActttttcttctctcttttttactacaaaacagaaacgcgccattttcacatatgttgatgttggggtgatgctggagatgaatatgaagtagaatttttttttttttacacttccCTTTAACTGTTTATGCATACTAGTACATGCATTTACAATGCTGAAACACCTGGACGTGCTTCATAAGCTAAGAGTGTTATATTCAGACACACGTAAAAATCAGTCAACTGACATCAAAGTCTCCCTATTTTAGATCACACACACATCTTATCCATTAGGATTTTTTCAAAGTTACTAATGAAGGTAATGTTTAGAGAGTACAGTGTGTCAGTGTTCAGGTCGACATCAGCCCACCTATATCTGCTGGAATGGACTCCTCCGTGCCTTTGTCCAGACACTCAACTGGCCGTCTGTGTGTTGAGCTCTGGTGTGCGCGTGCATTTATCCTTCCCAGGGCGGGCTACGTCGTCCGTCCACGTCCGTCTCTACGTGGTACAGCATGTCAGCCAACGTGTGTTCGATCACTGCT

Function

NR:

description
PREDICTED: set1/Ash2 histone methyltransferase complex subunit ASH2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2459994 True 975 lncRNA 0.38 2 11003261 11005434

Neighbor

gene id symbol gene type direction distance location
LOC110509607 LOC106562980 coding upstream 31 10974442 ~ 11003230 (+)
LOC110509315 LOC106562976 coding upstream 97096 10701054 ~ 10906165 (+)
si:dkeyp-72a4.1 LOC106562976 coding upstream 385113 10606155 ~ 10618148 (+)
zgc:63972 LOC106562974 coding upstream 506728 10473432 ~ 10496533 (+)
LOC110509604 LOC106562973 coding upstream 693493 10064167 ~ 10309768 (+)
LOC110509610 LOC106562982 coding downstream 15636 11021070 ~ 11022671 (+)
LOC110509611 LOC106562983 coding downstream 20315 11025749 ~ 11044674 (+)
LOC100136324 sr-bi coding downstream 71031 11076465 ~ 11112463 (+)
LOC110509317 LOC106562986 coding downstream 163151 11168585 ~ 11204291 (+)
LOC110509615 LOC106562990 coding downstream 201562 11206996 ~ 11215361 (+)
G2151358 NA non-coding upstream 1490 11001305 ~ 11001771 (+)
G2151347 NA non-coding upstream 20901 10981839 ~ 10982360 (+)
G2151315 NA non-coding upstream 61521 10941520 ~ 10941740 (+)
G2151307 NA non-coding upstream 73573 10929485 ~ 10929688 (+)
G2151415 NA non-coding downstream 113915 11119349 ~ 11119550 (+)
G2151417 NA non-coding downstream 117509 11122943 ~ 11123211 (+)
G2151421 NA non-coding downstream 121829 11127263 ~ 11127564 (+)
G2151397 NA non-coding downstream 130476 11135910 ~ 11139663 (+)
G2151424 NA non-coding downstream 135320 11140754 ~ 11144758 (+)
G2150729 NA other upstream 541041 10461753 ~ 10462220 (+)
G2149183 NA other upstream 1628749 9374000 ~ 9374512 (+)
LOC118945282 NA other upstream 1970966 8957803 ~ 9032295 (+)
G2146821 NA other upstream 3002771 8000129 ~ 8000490 (+)
G2151555 NA other downstream 354951 11359557 ~ 11432252 (+)
G2152150 NA other downstream 758790 11764224 ~ 11766351 (+)
G2152639 NA other downstream 1295358 12300792 ~ 12307438 (+)
G2153316 NA other downstream 1754446 12759880 ~ 12760490 (+)
G2154294 NA other downstream 2662855 13668289 ~ 13669170 (+)

Expression


Co-expression Network