G2151424


Basic Information

Item Value
gene id G2151424
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 11140754 ~ 11144758 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2460081
aataaagagagagcgagaaagggagtgggaaatagagagagatgaaagCAATTTAGTAATTTGCCTAAGAATATCTACTTAATTAATAGGTTCCCCGCTGTGTCATgcttacttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggttgattgTGTGTGTACCTTGCGTTTGGCGATGAGCTGTTCTCGGTAGCGGTGGGTGGAGTCTCCAGGGATTGTCCCCGCCCACAGGGACAAGCCCACCACCAGGTAGGCACATCCCATAATGCACAGCGGCAGGAAATAGTAAAGCAACACAACAGACAAATAGTACCTACACACATAGAGAGTTAGTTAGACACATACACAGATCTGTCAAAGTGAGCCCTTGAGCAAGGGCACTTAATCCTAGTTTCTCCAGTGTCGCCATTAATATTGGCAGATCCCTGGCTATGACCACaatctccgagggtgtctcagggagagtggaATATGCAAAAACTTTTCAAATTCACACATGCGTAAAAATGCACACCTATACAAATTCAGGGACCCGCCAAATTATTACACACAAAATGAGAAAGTCGGACAGGGATGTCACTCAGATAGTAGTCTAGTGGAACACAGAGTTCTGAAGTGCTTTCTTATCTCTGCGTCcgcctgtccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacatactgtctgcTGATTGATTATCGGTCTCGCTACAGGGAGTAGCGAGACTCACTGAAAGATGCATGAAATCAATTAACTGAGagcaggagagaagagggggagggaagaggaagaggaaggagggaaggtCACGAGGATTTATCATCTCCTAGCCCCTAATTTTACCATCAGACTAACTACAGGGAGTCAGCTGCTTATGGAAATGACTTCAATTCCTTCAACACCTGAGACTAATGGGGATactaaataacacacacacacacacacacacacacacacacacacacacacacacacacatatactcatgagagagggagagggagagcaggtggAGGGCGAGAAAAACGTTAAgaacaagtgagagagagaggcagaaaaagTGGGGACAGGGAGAGCGAAAACAGTGAAACTAGTGATGCCGGGATTCAATCCGATCGTGGGTTACAGGCATTGCGGCTTTTAAAggcaatttccgattgagccgataTAAGCAGCGTTTACTGGGATTTACTGGGATTAATGGGATGTCCGCGAACGCCGCAACTTTTCCTTTAGAAGTGGAAATGCCCGTAATCGGCCCGAGACAACTAGGAAAAAGCCAGGACCATGTGCATCcacatgcacgtgtgtgtgtgtgtgtttaggaacTATAAAATCAATAACGTCAGGTAATTAGTAGAGTAAATTCTGTAATAAAGAATTTTTTAATAGCCAAAAAGATCACTTTGTGGTTCTTGGGCAATTGATAAATAAGGTTTTTCGAGTAAAAAATGTCAAGTTAATGAATTAACATGAACTAATGATACTTGAACTGATAATGAACTGATTAACAAGAACTGGTAATACTGCCATCGTCATCGAAGCAGAGGCAATGGACATGTAcattcactatatatacaaaagtatgtggacacaccttcaaattagtggattcgggtatttcagccacacctgttgctaacaggtgtataaaaccaagtacgcagccatgcaatctccatagacaaacattagcagtagaatggccttactgaagagctcagtgactttcaacgtccAATACTTTCAatgtccaacaagtcagttcgtcaaatttctgccctgctagagttgccccggtcaactgtaagtgctgttattgtgaagtggaaacatctaggagcaactaCGGCTCAGCCCCGAAGGGGTAGGCCACcccaaggaaaagggtggctatttgtaGAATCTCAAATGACACATAATGACACATATGTGTCTCAAATGACACATAGAATGTCAATGACACATAAGAAGATATTTACGAAGTTCCTAAGAGAACCACAAATTCCTAAGAACATTTTGAGGAATTGCGTATACGAACTATCTTATCTTCTTATTTTTTTCCTTAAGAAACTTCTTACGTTTTTTCGTTAGTAATGTTTTGTGAATCCAGCCCCAGGtgaccccatgaagctggttgagagaatgccaagagtgtgcaaagctgtcatcaaggcaaatggtggctactttgaagaatctcaaatatgttttgatttgtttaacacttttttggttactccatgattccatatgtgttatttcaaagttttgatgtcttcactattattctacaatgtagaaaataataaaaaataaagaaaaacttgtGACCGgttagtgtatatacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtgggacactcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattaTTGGAGTAGATAGCccgagtgaatttacaaacgcaacCATAAAGTCTCGGTGGGCTAGTGACTGAAAACAGGCATAACTGAAACAAAAGTGTCTTTTAACTCTCCGTTCAAAGGTTGTCATGGAATTTCTCATATGCACCTTCATTTGTAACAAATACATGTTTCTATTATATGCCATTTGATATTAGTGGTACGTAGTGCCCTGTGTTTTGGTTAATCGTGTCACGTGACCtggatttgaacctttatttcaaGCTTTTTCATCAAACTGTCCCCTTTTCTTTTTGTATCAGACGGTCTGGCAACATCCTCAGACAATTGCTTACATTTTTGGTCTAATTCTCATTTGGAAAAGGCTTAAAATAAAAGGTTAAACGCCAAGTCATGTGACATGATTAAACAAAAGCGTTGGCTGCGGATCCGACTTTCTTTTTCTTCCAAACGCGGAAGGTCCCAAATCTTCTGTGCATATGGGGATCACGTTCTGCACGTGTGTTTCTTAATACCTGTACTTCACACTCACATTTTGTTGGTCTCCTTCCCTTCACATATCTCACTGTCAATCGTGAATGATAATTCTTCAAGTTTTACCGGTGAAACGGCCTTGCAGCATCAaccatttgatctcaatcagtttaaCAGGGATCTGCACATAAGATCGTATTGAGTTATAGGGCTTACAGTGTTGTTTTCAATGATGTACAGTGAAATAATTTTATAGCATAGggtgttaacaaactgtagcatTGCCCACCTGTGTCTTTTTCCTCGTGGCACGCAGTTGAGTTTTGGCCATATGAGAGAAAAATGTGGTGGTGTTTTTGTCTTCCAGTAACATTATACTATGCCTCTATATTCTGTTCGGTAGAACTATCATAGTATCATAGGTAGGTACTATCATTATGTGATCGTGCAGACATTGATTCCACTTTGATCTGACTTTATTAAAAGGAGAACCATTTGCCAGAGTAGCCTGTTCTCTACGATTATAGCAGAGTGTCCAAAGTACAAAATAAAGACATGCGCAGAAGCTTCAGGAACAAATTGTCTCCAGAGCCACACGGGGTCCTAACCATTATGACATTGAAAATCATCCCCTGTCATGACAGAGGACAGAGATGTGAACATTTGTGGGAGATTTGTTTCTGCTGAATTGGAGGGTCCACTCCAGCGTGGGCTTTGATGTCATATCAAACACATAGACAGAAATAGTGTTATGTAGTTTAAAAAATCCCCTTCTACGGCTGGTTGCACTATATGATGTTAGTGATTTTCAAATAGAATTAttcaagtatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2460081 True 3933 lncRNA 0.41 2 11140754 11144758

Neighbor

gene id symbol gene type direction distance location
LOC100136324 sr-bi coding upstream 28291 11076465 ~ 11112463 (+)
LOC110509611 LOC106562983 coding upstream 96080 11025749 ~ 11044674 (+)
LOC110509610 LOC106562982 coding upstream 118083 11021070 ~ 11022671 (+)
LOC110509607 LOC106562980 coding upstream 137524 10974442 ~ 11003230 (+)
LOC110509315 LOC106562976 coding upstream 234589 10701054 ~ 10906165 (+)
LOC110509317 LOC106562986 coding downstream 23827 11168585 ~ 11204291 (+)
LOC110509615 LOC106562990 coding downstream 62238 11206996 ~ 11215361 (+)
LOC118945263 NA coding downstream 80318 11225076 ~ 11228621 (+)
LOC110509616 LOC106563016 coding downstream 165699 11310457 ~ 11313974 (+)
trnaa-ugc-223 NA coding downstream 194541 11339299 ~ 11339370 (+)
G2151397 NA non-coding upstream 1091 11135910 ~ 11139663 (+)
G2151421 NA non-coding upstream 13190 11127263 ~ 11127564 (+)
G2151417 NA non-coding upstream 17543 11122943 ~ 11123211 (+)
G2151415 NA non-coding upstream 21204 11119349 ~ 11119550 (+)
G2151341 NA non-coding upstream 135320 11003261 ~ 11005434 (+)
G2151466 NA non-coding downstream 86254 11231012 ~ 11231219 (+)
G2151468 NA non-coding downstream 89718 11234476 ~ 11234704 (+)
G2151469 NA non-coding downstream 90244 11235002 ~ 11235207 (+)
G2151436 NA non-coding downstream 95015 11239773 ~ 11240666 (+)
G2151430 ubb non-coding downstream 97236 11241994 ~ 11243137 (+)
G2150729 NA other upstream 678534 10461753 ~ 10462220 (+)
LOC110509604 LOC106562973 other upstream 831675 10064167 ~ 10309768 (+)
G2149183 NA other upstream 1766242 9374000 ~ 9374512 (+)
LOC118945282 NA other upstream 2108459 8957803 ~ 9032295 (+)
G2146821 NA other upstream 3140264 8000129 ~ 8000490 (+)
G2151555 NA other downstream 215627 11359557 ~ 11432252 (+)
G2152150 NA other downstream 619466 11764224 ~ 11766351 (+)
G2152639 NA other downstream 1156034 12300792 ~ 12307438 (+)
G2153316 NA other downstream 1615122 12759880 ~ 12760490 (+)
G2154294 NA other downstream 2523531 13668289 ~ 13669170 (+)

Expression


Co-expression Network