Gene
RNA
| Item | Value |
|---|---|
| gene id | G2151894 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 11245236 ~ 11252463 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2460626 | True | 678 | lncRNA | 0.42 | 2 | 11245236 | 11252463 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100135966 | rps27a | coding | downstream | 1231 | 11241994 ~ 11244060 (-) |
| LOC100136736 | LOC100136736 | coding | downstream | 8899 | 11232998 ~ 11236337 (-) |
| LOC110509613 | LOC106562989 | coding | downstream | 26280 | 11215478 ~ 11218956 (-) |
| LOC118945308 | NA | coding | downstream | 51737 | 11190570 ~ 11193499 (-) |
| LOC110509316 | LOC106563014 | coding | downstream | 86234 | 11139422 ~ 11159002 (-) |
| LOC110509360 | myo18b | coding | upstream | 63180 | 11315643 ~ 11347641 (-) |
| LOC110509319 | LOC106562995 | coding | upstream | 77486 | 11329949 ~ 11333529 (-) |
| LOC110512753 | LOC106568375 | coding | upstream | 98731 | 11351194 ~ 11448019 (-) |
| LOC110509320 | cryba4 | coding | upstream | 196511 | 11448974 ~ 11452011 (-) |
| LOC110509622 | NA | coding | upstream | 212381 | 11464844 ~ 11468057 (-) |
| G2151846 | NA | non-coding | downstream | 4689 | 11240212 ~ 11240547 (-) |
| G2151845 | NA | non-coding | downstream | 5128 | 11239773 ~ 11240108 (-) |
| G2151799 | NA | non-coding | downstream | 111540 | 11132594 ~ 11133696 (-) |
| G2151802 | NA | non-coding | downstream | 112742 | 11132140 ~ 11132494 (-) |
| G2151839 | NA | non-coding | downstream | 117433 | 11127602 ~ 11127803 (-) |
| G2151944 | NA | non-coding | upstream | 104297 | 11356760 ~ 11357715 (-) |
| G2151952 | NA | non-coding | upstream | 173424 | 11425887 ~ 11427513 (-) |
| G2151953 | NA | non-coding | upstream | 173712 | 11426175 ~ 11428409 (-) |
| G2151771 | NA | other | downstream | 251357 | 10993166 ~ 10993879 (-) |
| ttll11 | LOC106562979 | other | downstream | 275935 | 10923070 ~ 10969315 (-) |
| G2151189 | NA | other | downstream | 445918 | 10718021 ~ 10799318 (-) |
| ttc33 | LOC106568686 | other | downstream | 1807699 | 9365212 ~ 9437537 (-) |
| LOC110509625 | LOC106568355 | other | upstream | 204155 | 11456618 ~ 11525214 (-) |
| G2152107 | NA | other | upstream | 469609 | 11722072 ~ 11722479 (-) |
| atg10 | atg10 | other | upstream | 688999 | 11940630 ~ 11945825 (-) |
| G2153174 | NA | other | upstream | 1396713 | 12649176 ~ 12649495 (-) |
| G2153683 | NA | other | upstream | 1834990 | 13087453 ~ 13091356 (-) |
