G2151944


Basic Information

Item Value
gene id G2151944
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 11356760 ~ 11357715 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2460682
tctgtctgtctctctctcgctctgtctgtctgtctctctctcgctctgtctgtctgtctctctctcgctctgtctgtctgtctctctctcgctctgtctgtctgtctctctctcgctctgtctgtctgtctctctctcgctctgtctgtctgtctctctctcgctctgtctgtctgtctctctctcgctctgtctgtctgtctctctctcgctctgtctgtctgtctctctctcgctctgtctgtctctctctcgctctgtctgtctctctctcgctctgtctgtctctctctcgctctgtctgtctctctctcgctctgtctgtctctctctcgctctgtctgtctctctctcgctctggctctctggctctctcgctctggctctctcgctctggctctcaggctctctcgctctggctctcaggctctctcgctcttgctctctcgctctggctctcaggctctctcgctctggctctctcgctctggctctctctcgctctggctctctcgctctggctctcAGGCTCTGGCTCTCTGGATTTCTGAAAAACCTGGGAGTTTTGGGAA

Function

NR:

description
PREDICTED: E3 ubiquitin-protein ligase RBBP6-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2460682 True 572 lncRNA 0.56 2 11356760 11357715

Neighbor

gene id symbol gene type direction distance location
LOC110509360 myo18b coding downstream 9119 11315643 ~ 11347641 (-)
LOC110509319 LOC106562995 coding downstream 23231 11329949 ~ 11333529 (-)
LOC110509318 LOC106562994 coding downstream 55936 11250269 ~ 11300824 (-)
LOC100135966 rps27a coding downstream 112755 11241994 ~ 11244060 (-)
LOC100136736 LOC100136736 coding downstream 120423 11232998 ~ 11236337 (-)
LOC110509320 cryba4 coding upstream 91259 11448974 ~ 11452011 (-)
LOC110509622 NA coding upstream 107129 11464844 ~ 11468057 (-)
LOC118945324 jelt coding upstream 145443 11503158 ~ 11509942 (-)
LOC110509625 LOC106568355 coding upstream 165738 11456618 ~ 11525214 (-)
LOC110509627 LOC106563113 coding upstream 286318 11644033 ~ 11655110 (-)
LOC110512753 LOC106568375 non-coding downstream 2190 11351194 ~ 11448019 (-)
G2151894 NA non-coding downstream 104297 11245236 ~ 11252463 (-)
G2151846 NA non-coding downstream 116213 11240212 ~ 11240547 (-)
G2151845 NA non-coding downstream 116652 11239773 ~ 11240108 (-)
G2151952 NA non-coding upstream 68172 11425887 ~ 11427513 (-)
G2151953 NA non-coding upstream 68460 11426175 ~ 11428409 (-)
G2151954 NA non-coding upstream 68819 11426534 ~ 11427394 (-)
G2151955 NA non-coding upstream 74106 11431821 ~ 11432908 (-)
G2151963 NA non-coding upstream 95308 11453023 ~ 11453224 (-)
G2151771 NA other downstream 362881 10993166 ~ 10993879 (-)
ttll11 LOC106562979 other downstream 387459 10923070 ~ 10969315 (-)
G2151189 NA other downstream 557442 10718021 ~ 10799318 (-)
ttc33 LOC106568686 other downstream 1919223 9365212 ~ 9437537 (-)
G2152107 NA other upstream 364357 11722072 ~ 11722479 (-)
atg10 atg10 other upstream 583747 11940630 ~ 11945825 (-)
G2153174 NA other upstream 1291461 12649176 ~ 12649495 (-)
G2153683 NA other upstream 1729738 13087453 ~ 13091356 (-)

Expression


Co-expression Network