G2151555


Basic Information

Item Value
gene id G2151555
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 11359557 ~ 11432252 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2460224
TCCTCGTGGCCCAGCTGTTTGTTCTTGGTCCTCTTGCGGGCCTCGTTCTTGTCCGTGTCGGAGTTGACCGCCTCGTACACCGTCTCAGCCACCTCCTGCTGCCAGCGCTCTGAGATGACCAGGGGGAAGTTCTTGTACAATTCCTGGTCACTGTCCAACAAttgataCCCTTGGTGTCCTCTTCATCAAAGGAGCCAATGTCAAATGCATCTGCTGCATTTACCTCTCCCcttggagggatgagagggggagaatactggaggagagagagagagagacagagagacagagagagacacacagagagagagacacacagagagagagacacacagagagagacacacagagagagagagacacacagagagagagagacacacagagagagagagacacacagagagagagagacacacagagagagagagacacacagagagagagagacacacagagatagagacacacagagatagagacacacagagatagagacacacagagatagagacactctcaagagaagacaggctatgtgctcactgcccacaaaatgaggtggaaactgagctgcacttcctaacctcctgcccaatgtatgatcatattagagagacatatttccctcagattacacagatccacaaagaattcgaaaacaaatccaaatttgaaaaactcccatatctactgggtgaaattccacagtgtgccatcac
>TU2460223
agagaaacaaaacAAAGTCACTGAGGCAGGTATGAGGTGTAGGTGACGTGATTCCTCAGATGTTAACCCCCGTCACCGGTAGCTGTGAGATCTGCTGAGCTGGGCAGCATGACTGTAATTAAAGCGACCTGGAACGCGCCCAAAGCCTCCAGTTGTGTAACGTCCAAACTATTTGGGAAGGACTTTCTTTGTGGGCCGCTCTGCTTACTGGCAGTGTCAATATTGAACACTGATGGAGCCACGTTTACACCTCAgcctcctgtctgtgtgtatgttcgTCATGCACTAGGATGTAAGAGTGTGTAAATCCGGATTACAGGTTTAGCTTTTATATAATGCTGTGTATTTTTGATACCCTTggtggtttcatgagataagggttgtgtgtgtgtgttaccttgatgGTATCATAAgataagggttgtgtgtgtgtgttaccttgataCCCTTGGTGGTATCATAAgataagggttgtgtgtgtgtgttaccttgataCCCTTGGTGGTTTCATGAgataagggttgtgtgtgtgtgttaccttgataCCCTTGGTGGTTTCATGAgataagggttgtgtgtgtgtgttaccttgataCCCTTGGTGGTTTCATGAgataagggttgtgtgtgtgtgttaccttgataCCCTTGGTGTTTCATGAgataagggttgtgtgtgtgtgttaccttgataCCCTTGGTGGTTTCATGAgataagggttgtgtgtgtgtgttaccttgataCCCTTGGTGGTTTCATGAgataagggttgtgtgtgtgtgttaccttgataCCCTTGGTGTTTTCATGAgataagggttgtgtgtgtgtgttaccttgataCCCTTGGTGTTTTCATGAgataagggttgtgtgtgtgtgttaccttgataCCCTTGGTGTCCTCTTCATCAAAGGAGCCAATGTCAAATGCATCTGCTGCATTTACCTCTCCCcttggagggatgagagggggagaatactggaggagagagagagagagacagagagacagagagacagagagagagagagagaggagaggtaaaggtgaggagagagaaagaaagagagagagagagagagacagagagagacagagagagagagagagagagagagaggagaggtaaaggtgaggagagagaaagaaagagagagaaagagagaacataaAATGAGAGAGATAACATGAAATttaacataccaattaggatctgtctaaaatgacttgaatcagttatagagcccattgcccttcatggttgtgaggtctgggttctgctcaccaaccaagaattcacaaaatgggacaaacaccaaatcaagactctgcacgcagaattctttAAAAATAtactctgtgtacaacgtagaacaccaaataatgcatgcagagcagaattaggccgatacccactaattatcaaaatccagaaaagagccgttaaattctacaaccacctaaaaggaagtgattcccaaaccttccataacaaagccatcacctacagagagatgaacctggagaagagtcccctaagcaagctggtcctggggctctgttcacaaacacaaacacaccctacagagccccaggacaacagcacaattagacccaaccaaatcatgagaaaacaaaaagatagttacttcacacattggaaagaattaacaaaaaaacagagcaaactagaatgctatttggccctaaacagagagtacacagcagcagaatacctgaccactgtgactgacccaaacttaaggaaagctttgactatgtacagactatGTACAGTGAGTATAGCcatgctattgagaaaggccaccgttggcagacatggctctcaagagaagacaggctatgtgctcactgcccacaaaatgaggtggaaactgagatgcacttcctcctgtccaatgtatgaccatattagagacacatatttccctcagattacacagatccacaaagaatttgaaaacaaacccaattttgaaaaactcccatatctactgggtgaaattccacagtgtgccatcacagcagcaagatttgtgacctgttgccacaagaaaatggcaaccagtgaagaacacacaaatgtatgcttattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2460224 False 722 lncRNA 0.49 4 11359557 11432252
TU2460223 True 2122 TUCP 0.43 4 11360385 11366492

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-223 NA coding upstream 20187 11339299 ~ 11339370 (+)
LOC110509616 LOC106563016 coding upstream 45583 11310457 ~ 11313974 (+)
LOC118945263 NA coding upstream 130936 11225076 ~ 11228621 (+)
LOC110509615 LOC106562990 coding upstream 144196 11206996 ~ 11215361 (+)
LOC110509317 LOC106562986 coding upstream 155266 11168585 ~ 11204291 (+)
LOC110509623 crybb1 coding downstream 14142 11446394 ~ 11458975 (+)
LOC110509620 LOC106563087 coding downstream 27673 11459925 ~ 11464582 (+)
LOC118945340 NA coding downstream 104019 11536271 ~ 11560808 (+)
LOC118945334 NA coding downstream 128660 11560912 ~ 11570700 (+)
LOC110509626 LOC106563084 coding downstream 154280 11586532 ~ 11634525 (+)
G2151474 NA non-coding upstream 2745 11301081 ~ 11356812 (+)
G2151471 NA non-coding upstream 5001 11353305 ~ 11354556 (+)
G2151430 ubb non-coding upstream 116420 11241994 ~ 11243137 (+)
G2151436 NA non-coding upstream 118891 11239773 ~ 11240666 (+)
G2151469 NA non-coding upstream 124350 11235002 ~ 11235207 (+)
G2151603 jelt non-coding downstream 32592 11464844 ~ 11467954 (+)
G2151723 NA non-coding downstream 289713 11721965 ~ 11722354 (+)
G2151724 NA non-coding downstream 291144 11723396 ~ 11723678 (+)
G2151725 NA non-coding downstream 291656 11723908 ~ 11724149 (+)
G2151726 NA non-coding downstream 292086 11724338 ~ 11724554 (+)
G2150729 NA other upstream 897337 10461753 ~ 10462220 (+)
LOC110509604 LOC106562973 other upstream 1050478 10064167 ~ 10309768 (+)
G2149183 NA other upstream 1985045 9374000 ~ 9374512 (+)
LOC118945282 NA other upstream 2327262 8957803 ~ 9032295 (+)
G2146821 NA other upstream 3359067 8000129 ~ 8000490 (+)
G2152150 NA other downstream 331972 11764224 ~ 11766351 (+)
G2152639 NA other downstream 868540 12300792 ~ 12307438 (+)
G2153316 NA other downstream 1327628 12759880 ~ 12760490 (+)
G2154294 NA other downstream 2236037 13668289 ~ 13669170 (+)
G2154391 NA other downstream 2340456 13772708 ~ 13776134 (+)
G2151568 NA non-coding downstream 45438 11411930 ~ 11412401 (+)
G2151577 NA non-coding downstream 59380 11425872 ~ 11437818 (+)

Expression


Co-expression Network