G2151568


Basic Information

Item Value
gene id G2151568
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 11411930 ~ 11412401 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2460242
ccccacccctacatactgcttgacgcgCCACTTCAGCGTTTGTGGGTCTTCTTTCTCCAACGGCGTCCATCTGACCAGCGgtgtgaacacacacagacagacacagacagacagacagaggcagacagacacacaggcagacagacacacacaggcagacagacacacacaggcagacagacacacacaggcagacagacacacacaggcagacagacacacacaggcagacacaagcagggaGGAAAAACAAAACCACTttattctctcctcttccccctctcctttatctcttcTCCAGACCCTACACAGTATTTCCTCTCCAGGCCAAGCACCTCCCTCTCCCCGTCCTCCTCTGTTCCTGTCAGAGTGGCACGCAGTcagacaagacacacacacaccagagaacaAGAATTTTGCCTTACTGCGACCTCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2460242 True 436 lncRNA 0.54 2 11411930 11412401

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-223 NA coding upstream 72560 11339299 ~ 11339370 (+)
LOC110509616 LOC106563016 coding upstream 97956 11310457 ~ 11313974 (+)
LOC118945263 NA coding upstream 183309 11225076 ~ 11228621 (+)
LOC110509615 LOC106562990 coding upstream 196569 11206996 ~ 11215361 (+)
LOC110509317 LOC106562986 coding upstream 207639 11168585 ~ 11204291 (+)
LOC110509623 crybb1 coding downstream 33993 11446394 ~ 11458975 (+)
LOC110509620 LOC106563087 coding downstream 47524 11459925 ~ 11464582 (+)
LOC118945340 NA coding downstream 123870 11536271 ~ 11560808 (+)
LOC118945334 NA coding downstream 148511 11560912 ~ 11570700 (+)
LOC110509626 LOC106563084 coding downstream 174131 11586532 ~ 11634525 (+)
G2151557 NA non-coding upstream 12686 11359182 ~ 11399244 (+)
G2151474 NA non-coding upstream 55118 11301081 ~ 11356812 (+)
G2151471 NA non-coding upstream 57374 11353305 ~ 11354556 (+)
G2151430 ubb non-coding upstream 168793 11241994 ~ 11243137 (+)
G2151436 NA non-coding upstream 171264 11239773 ~ 11240666 (+)
G2151577 NA non-coding downstream 13471 11425872 ~ 11437818 (+)
G2151603 jelt non-coding downstream 52443 11464844 ~ 11467954 (+)
G2151723 NA non-coding downstream 309564 11721965 ~ 11722354 (+)
G2151724 NA non-coding downstream 310995 11723396 ~ 11723678 (+)
G2151725 NA non-coding downstream 311507 11723908 ~ 11724149 (+)
G2151555 NA other upstream 45438 11359557 ~ 11432252 (+)
G2150729 NA other upstream 949710 10461753 ~ 10462220 (+)
LOC110509604 LOC106562973 other upstream 1102851 10064167 ~ 10309768 (+)
G2149183 NA other upstream 2037418 9374000 ~ 9374512 (+)
LOC118945282 NA other upstream 2379635 8957803 ~ 9032295 (+)
G2152150 NA other downstream 351823 11764224 ~ 11766351 (+)
G2152639 NA other downstream 888391 12300792 ~ 12307438 (+)
G2153316 NA other downstream 1347479 12759880 ~ 12760490 (+)
G2154294 NA other downstream 2255888 13668289 ~ 13669170 (+)
G2154391 NA other downstream 2360307 13772708 ~ 13776134 (+)

Expression


Co-expression Network