Gene
RNA
| Item | Value |
|---|---|
| gene id | G2152088 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 11696326 ~ 11696563 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2460840 | True | 238 | lncRNA | 0.28 | 1 | 11696326 | 11696563 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509627 | LOC106563113 | coding | downstream | 41216 | 11644033 ~ 11655110 (-) |
| LOC110509625 | LOC106568355 | coding | downstream | 171112 | 11456618 ~ 11525214 (-) |
| LOC118945324 | jelt | coding | downstream | 186384 | 11503158 ~ 11509942 (-) |
| LOC110509622 | NA | coding | downstream | 228269 | 11464844 ~ 11468057 (-) |
| LOC110509320 | cryba4 | coding | downstream | 244315 | 11448974 ~ 11452011 (-) |
| vcanb | LOC106568264 | coding | upstream | 156766 | 11853329 ~ 11884996 (-) |
| xrcc4 | xrcc4 | coding | upstream | 189128 | 11885691 ~ 11915884 (-) |
| atg10 | atg10 | coding | upstream | 244067 | 11940630 ~ 11945825 (-) |
| zcchc9 | zcchc9 | coding | upstream | 265400 | 11961963 ~ 11966304 (-) |
| LOC110509644 | lage3 | coding | upstream | 430246 | 12126809 ~ 12127782 (-) |
| G2152011 | NA | non-coding | downstream | 58588 | 11633073 ~ 11637738 (-) |
| G2152055 | LOC107555460 | non-coding | downstream | 66931 | 11628521 ~ 11629395 (-) |
| G2152054 | NA | non-coding | downstream | 68268 | 11623592 ~ 11628058 (-) |
| G2151963 | NA | non-coding | downstream | 243102 | 11453023 ~ 11453224 (-) |
| G2151955 | NA | non-coding | downstream | 263418 | 11431821 ~ 11432908 (-) |
| G2152090 | NA | non-coding | upstream | 393 | 11696956 ~ 11697288 (-) |
| G2152091 | NA | non-coding | upstream | 898 | 11697461 ~ 11697908 (-) |
| G2152092 | NA | non-coding | upstream | 1374 | 11697937 ~ 11698168 (-) |
| G2152095 | NA | non-coding | upstream | 3891 | 11700454 ~ 11700768 (-) |
| G2152099 | NA | non-coding | upstream | 8024 | 11704587 ~ 11704790 (-) |
| LOC100135966 | rps27a | other | downstream | 452266 | 11241994 ~ 11244060 (-) |
| G2151771 | NA | other | downstream | 702447 | 10993166 ~ 10993879 (-) |
| ttll11 | LOC106562979 | other | downstream | 727025 | 10923070 ~ 10969315 (-) |
| G2151189 | NA | other | downstream | 897008 | 10718021 ~ 10799318 (-) |
| G2152107 | NA | other | upstream | 25509 | 11722072 ~ 11722479 (-) |
| G2153174 | NA | other | upstream | 952613 | 12649176 ~ 12649495 (-) |
| G2153683 | NA | other | upstream | 1390890 | 13087453 ~ 13091356 (-) |
| G2154361 | LOC106563107 | other | upstream | 2032270 | 13728833 ~ 13731096 (-) |
