G2151724


Basic Information

Item Value
gene id G2151724
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 11723396 ~ 11723678 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2460423
TTGCCTGGACAGTGAGTGATTGTGAAGTCGTATTTTTGTAGTTGAAGGATCATTCTCTGTAGCCTTGGCGGGGCTGCGGCAAGTCGTTTCCTCATAATTGACTCAAGGGGCTTGTGGTCGGATTCCACAATGACTTGTCGTCCATATATGTACTGATGGAAACGTTTACATCCAAACAGAATGGCGTAGAGCTCCTTTTCGATTTGCGTAGTTGATTTTACAGTCTGTGAGATTTGGAAGCGTAGCCGATGGGCTTTCCTTCTTGCAGTAGCACTGCACCTAG

Function

NR:

description
PREDICTED: hephaestin-like protein 1, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2460423 True 283 lncRNA 0.46 1 11723396 11723678

Neighbor

gene id symbol gene type direction distance location
cetn3 LOC106563079 coding upstream 3083 11716684 ~ 11720313 (+)
arrdc3b LOC106563080 coding upstream 30317 11685350 ~ 11693079 (+)
LOC110509626 LOC106563084 coding upstream 88871 11586532 ~ 11634525 (+)
LOC118945334 NA coding upstream 152696 11560912 ~ 11570700 (+)
LOC118945340 NA coding upstream 162588 11536271 ~ 11560808 (+)
mef2ca LOC106563077 coding downstream 22380 11742203 ~ 11834606 (+)
edil3b edil3 coding downstream 53173 11776851 ~ 11795498 (+)
hapln1b hapln1 coding downstream 97569 11821247 ~ 11852482 (+)
tmem167a tm167 coding downstream 192094 11915756 ~ 11926319 (+)
LOC110509638 NA coding downstream 224911 11948589 ~ 11951596 (+)
G2151723 NA non-coding upstream 1042 11721965 ~ 11722354 (+)
G2151603 jelt non-coding upstream 255442 11464844 ~ 11467954 (+)
G2151577 NA non-coding upstream 285578 11425872 ~ 11437818 (+)
G2151555 NA non-coding upstream 291144 11359557 ~ 11432252 (+)
G2151568 NA non-coding upstream 310995 11411930 ~ 11412401 (+)
G2151725 NA non-coding downstream 230 11723908 ~ 11724149 (+)
G2151726 NA non-coding downstream 660 11724338 ~ 11724554 (+)
G2151728 NA non-coding downstream 3127 11726805 ~ 11727076 (+)
G2152132 NA non-coding downstream 24651 11748329 ~ 11763998 (+)
G2150729 NA other upstream 1261176 10461753 ~ 10462220 (+)
LOC110509604 LOC106562973 other upstream 1414317 10064167 ~ 10309768 (+)
G2149183 NA other upstream 2348884 9374000 ~ 9374512 (+)
LOC118945282 NA other upstream 2691101 8957803 ~ 9032295 (+)
G2152150 NA other downstream 40546 11764224 ~ 11766351 (+)
G2152639 NA other downstream 577114 12300792 ~ 12307438 (+)
G2153316 NA other downstream 1036202 12759880 ~ 12760490 (+)
G2154294 NA other downstream 1944611 13668289 ~ 13669170 (+)
G2154391 NA other downstream 2049030 13772708 ~ 13776134 (+)

Expression


Co-expression Network