G2152132


Basic Information

Item Value
gene id G2152132
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 11748329 ~ 11763998 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2460890
tgtgtgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgttgggctcGTGGCCCACGGCTCAGGGAGGCTAATGTGTGCAGGTCTGAGTCGGCCAGCCTGGAGTTACTTAACGATGTTAAGGAACAAGGTGtcccctcacaaacacacacacgtccaaCATCCCCATTCAACCCTCTTCAGGGCCACCCAGCGGACCATGGTCCATGTGACAGAGGTTAGGGAGGTTTTAGGGATCAGAGTTCACAGGATAGGTGTGTTGGATTCCGGCTCTGGAACGTTGGCAGGAATCCGGCTTGGAGGAGAGTCGGTGTGGTCTTATATAGGATCCTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2460890 True 329 lncRNA 0.54 2 11748329 11763998

Neighbor

gene id symbol gene type direction distance location
cetn3 LOC106563079 coding upstream 28016 11716684 ~ 11720313 (+)
arrdc3b LOC106563080 coding upstream 55250 11685350 ~ 11693079 (+)
LOC110509626 LOC106563084 coding upstream 113804 11586532 ~ 11634525 (+)
LOC118945334 NA coding upstream 177629 11560912 ~ 11570700 (+)
LOC118945340 NA coding upstream 187521 11536271 ~ 11560808 (+)
edil3b edil3 coding downstream 12853 11776851 ~ 11795498 (+)
hapln1b hapln1 coding downstream 57249 11821247 ~ 11852482 (+)
tmem167a tm167 coding downstream 151774 11915756 ~ 11926319 (+)
LOC110509638 NA coding downstream 184591 11948589 ~ 11951596 (+)
LOC110509639 NA coding downstream 191626 11955624 ~ 11961875 (+)
G2151728 NA non-coding upstream 21253 11726805 ~ 11727076 (+)
G2151726 NA non-coding upstream 23775 11724338 ~ 11724554 (+)
G2151725 NA non-coding upstream 24180 11723908 ~ 11724149 (+)
G2151724 NA non-coding upstream 24651 11723396 ~ 11723678 (+)
G2151723 NA non-coding upstream 25975 11721965 ~ 11722354 (+)
G2152193 NA non-coding downstream 107079 11871077 ~ 11871721 (+)
G2152201 NA non-coding downstream 122555 11886553 ~ 11888533 (+)
G2152213 xrcc4 non-coding downstream 144622 11908620 ~ 11914282 (+)
G2151555 NA other upstream 381837 11359557 ~ 11432252 (+)
G2150729 NA other upstream 1286109 10461753 ~ 10462220 (+)
LOC110509604 LOC106562973 other upstream 1439250 10064167 ~ 10309768 (+)
G2149183 NA other upstream 2373817 9374000 ~ 9374512 (+)
LOC118945282 NA other upstream 2716034 8957803 ~ 9032295 (+)
G2152150 NA other downstream 226 11764224 ~ 11766351 (+)
G2152639 NA other downstream 536794 12300792 ~ 12307438 (+)
G2153316 NA other downstream 995882 12759880 ~ 12760490 (+)
G2154294 NA other downstream 1904291 13668289 ~ 13669170 (+)
G2154391 NA other downstream 2008710 13772708 ~ 13776134 (+)

Expression


Co-expression Network