G2152150


Basic Information

Item Value
gene id G2152150
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 11764224 ~ 11766351 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2460909
ATCCCATGTGTTCCATTGTACCCCCGGGCAAACTAAATCAACCAAGCACAGCTAAAATACTCCACAGAGTTTCACATTTGAGCCCGATCTGGAGGTTATGTGTTGACGTGTCAGTGTTGTATAACGTGGTGTTTTGCCTGATAGCTGATGTTGTAACGTGGTGTGAAGGTGGGTCAGGTCTCCCTCTTCACCTGTCCTCCACGAGGCCACCTCATGGTTAGTCTGCCAGCCCCGACAGGAGCAGCATATCATTTACTGTTAATCTACTGTAATCCACCATAATCCCATCACACTCAATTACTGTAATCTCAATATGCTCCTTCTAATCCCTCTCACCAAGCTtcaactctcctctcccttcatctcttctccccatccctcctctctttcctccccctccctctcttcctggctGACATGGTCACCTCTAGTCTGTAGTCTATCTCCTGGGGGACAAATAAATGAGGATGGATATttccctcctctttctgtctcagttccctttccttctctctctcctctctcactttcaagcctctctatcgctccctcgccccttctcctcctttctcccttaCCCTCTATGCCAATTTATTCCCTTCCAGATTGTTTGTGTTCCGTCTACCTATCAGCCTCTctcgatcccccccccccccttccttgaccttttctgtccctgtccctccGTCTCCTGCGCGCCAGTGTGTTTGGTTAGTTCAGTCTTGGCAGGGCCAGTCATTCTAACTGGTTTCCCGTCCAGCTCTCTTACCACAGAGTTGATAGAGCCACTGTGACTTCACGCACATGCATGCCAGTGCATTCCTGTGCTTTGAGTTGTgtgctctgtttgtgtgtgtgtgtgtctgttgttggTGCTCTTAAATGTTTTCACCTGCAAATATGCTGCTGTCCACACGGCTCACACCACAGACACAGAGTGCAACAATCTAGAGACCGACTACCAAAGCGAAACAGAGATGACCCCGACTCAGTCTTTTTACTGGAGTGTGTCCTGTCCATAAATTGGTAGTGACTTTCAATATACTATAACAACATACGGGTGTATTTCTCAGCATCTCACACAGCTCCTGTGCTTTGTATTGGTAAAAAAAACTCATGACCTAGCTGTGAAACCTTGTGAGCCGTAGAACTATCTGCCTGACAGGAATGGAGCAGAATAGAGTCTCCTTTGTCTGGGTTTCTTTCCCCAATAAtgagggggaggtgtgtgtgcgcgttcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttggagcttGCTGGATTTGTTGCTCGTGGATCAGGATCATGGCTATAAATAACGGAGAACTTCTGCATTCCTCACCCCCTTTTCTACTAACCCTATTTCGCTCcattctgtggtgtgtgtgtgtgtgtgtgtgtcgcagaTTGAAAACAGCTGAAGCTCTCAGTGAGGCTCGTCAAAaagaacacacaaaacacacacacagtcccagtgGTTACTCCAGCTCTCTTTGTGTAGTCAATTCCTTCCTGTTAAATGCCTGGAAACCAGCAGCAGGCTAAAAATAGACGGCTGCTGCTAAGAATAGCCTCTCTGGGATGTGCGTATgagtttatgtgtgtatgtgtgtgtgtgttgtatgtgtgtgtgtgtgtcttggcgGGCTGGCAGACATGAGGAGAAATAGAGGGGTCGTGTAACTTGGTCAAAAAAACGTTAGATTTCatctcattttaacattctgtcataaataGCACATGTCCAACTTCATAAAAATACAAGTTTTCCTATCTCAAGAGTTTATATAAAAAATTTGAATAACTACAGTAAGTACCTATTATGttccaaataaagtaacagggttgactgtaacagggttgactgtaacagggttgactgtaacagggttgaccatttCACCTTAAATCATGTTTGTTGTGTGCAATTGAATGGAAGCTTCACAATAAATTTGAAAAAAATTAAATTGCCAATGTTTTTTTgcctgtctatctatgagtaAGAGGGTTGAAGTGTTTtccaacacaaaacaacagcaaatgacaAAAAAAGAGTcaaaccagctcacctgctttttacacta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2460909 True 2094 TUCP 0.45 2 11764224 11766351

Neighbor

gene id symbol gene type direction distance location
cetn3 LOC106563079 coding upstream 43911 11716684 ~ 11720313 (+)
arrdc3b LOC106563080 coding upstream 71145 11685350 ~ 11693079 (+)
LOC110509626 LOC106563084 coding upstream 129699 11586532 ~ 11634525 (+)
LOC118945334 NA coding upstream 193524 11560912 ~ 11570700 (+)
LOC118945340 NA coding upstream 203416 11536271 ~ 11560808 (+)
edil3b edil3 coding downstream 10500 11776851 ~ 11795498 (+)
hapln1b hapln1 coding downstream 54896 11821247 ~ 11852482 (+)
tmem167a tm167 coding downstream 149421 11915756 ~ 11926319 (+)
LOC110509638 NA coding downstream 182238 11948589 ~ 11951596 (+)
LOC110509639 NA coding downstream 189273 11955624 ~ 11961875 (+)
G2152132 NA non-coding upstream 226 11748329 ~ 11763998 (+)
G2152148 NA non-coding upstream 1299 11761826 ~ 11762925 (+)
G2152149 NA non-coding upstream 1798 11762011 ~ 11762426 (+)
G2151728 NA non-coding upstream 37148 11726805 ~ 11727076 (+)
G2151726 NA non-coding upstream 39670 11724338 ~ 11724554 (+)
G2152193 NA non-coding downstream 104726 11871077 ~ 11871721 (+)
G2152201 NA non-coding downstream 120202 11886553 ~ 11888533 (+)
G2152213 xrcc4 non-coding downstream 142269 11908620 ~ 11914282 (+)
G2151555 NA other upstream 397732 11359557 ~ 11432252 (+)
G2150729 NA other upstream 1302004 10461753 ~ 10462220 (+)
LOC110509604 LOC106562973 other upstream 1455145 10064167 ~ 10309768 (+)
G2149183 NA other upstream 2389712 9374000 ~ 9374512 (+)
LOC118945282 NA other upstream 2731929 8957803 ~ 9032295 (+)
G2152639 NA other downstream 534441 12300792 ~ 12307438 (+)
G2153316 NA other downstream 993529 12759880 ~ 12760490 (+)
G2154294 NA other downstream 1901938 13668289 ~ 13669170 (+)
G2154391 NA other downstream 2006357 13772708 ~ 13776134 (+)
G2154438 NA other downstream 2039662 13806013 ~ 13813970 (+)

Expression


Co-expression Network