G2152193


Basic Information

Item Value
gene id G2152193
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 11871077 ~ 11871721 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2460963
CTTTTTTCCTCCTGTAGAAAATAGCAACATGTCTCTTTTTCCTCCTGTAGAAAATAGCAACATGTCTCCTTTTTCCTCCTGTAGAAAATAGCAACATGTCTCTTTTTTCCTCCTGTAGAAAATAGCAACATGTCTCTTTTTTCCTCCTGTAGAAAATAGCAACATGTCTCTTTTTCCTCCTGTAGAAAATAGCAACATGTCTCCTTTTTCCTCCTGTAGAAAATAGCAACATGTCTCTTTTTTCCTCCTGTAGAAAATAGCAACATGTCTCTTTTTTCCTCTTGTAGAAAATAGCAACATGTCTCTTTTTTCCTCCTGTAGAAAATAGCAACATGTCTCTTTTTTCCTCCTGTAGAAAATAGCAACAAGTCTCTTTTTTCCTCTTGTAGAAAATAGCAACATGTCTCTTTTTTCCTCCTGTAGAAAATAGCAACATGTCTCTTTTTCCTCCTGTAGAAAATAGCAACAAGTCTCTTTTTTCCTCTAGTAACCCTTTACCATCAGTGGAAAAGGGAAGGCCTACATACATGCAAAGTCATAACA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106612438

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2460963 True 543 lncRNA 0.36 2 11871077 11871721

Neighbor

gene id symbol gene type direction distance location
hapln1b hapln1 coding upstream 20768 11821247 ~ 11852482 (+)
edil3b edil3 coding upstream 75579 11776851 ~ 11795498 (+)
mef2ca LOC106563077 coding upstream 95073 11742203 ~ 11834606 (+)
cetn3 LOC106563079 coding upstream 150764 11716684 ~ 11720313 (+)
arrdc3b LOC106563080 coding upstream 177998 11685350 ~ 11693079 (+)
tmem167a tm167 coding downstream 44051 11915756 ~ 11926319 (+)
LOC110509638 NA coding downstream 76868 11948589 ~ 11951596 (+)
LOC110509639 NA coding downstream 83903 11955624 ~ 11961875 (+)
LOC110509640 LOC106563068 coding downstream 107720 11979441 ~ 11984838 (+)
LOC118945327 NA coding downstream 178721 12050442 ~ 12053419 (+)
G2152132 NA non-coding upstream 107079 11748329 ~ 11763998 (+)
G2152148 NA non-coding upstream 108152 11761826 ~ 11762925 (+)
G2152149 NA non-coding upstream 108651 11762011 ~ 11762426 (+)
G2152201 NA non-coding downstream 14832 11886553 ~ 11888533 (+)
G2152213 xrcc4 non-coding downstream 36899 11908620 ~ 11914282 (+)
G2152259 NA non-coding downstream 133867 12005588 ~ 12005877 (+)
G2152150 NA other upstream 104726 11764224 ~ 11766351 (+)
G2151555 NA other upstream 504585 11359557 ~ 11432252 (+)
G2150729 NA other upstream 1408857 10461753 ~ 10462220 (+)
LOC110509604 LOC106562973 other upstream 1561998 10064167 ~ 10309768 (+)
G2149183 NA other upstream 2496565 9374000 ~ 9374512 (+)
G2152639 NA other downstream 429071 12300792 ~ 12307438 (+)
G2153316 NA other downstream 888159 12759880 ~ 12760490 (+)
G2154294 NA other downstream 1796568 13668289 ~ 13669170 (+)
G2154391 NA other downstream 1900987 13772708 ~ 13776134 (+)
G2154438 NA other downstream 1934292 13806013 ~ 13813970 (+)

Expression


Co-expression Network