G2152271


Basic Information

Item Value
gene id G2152271
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 12021886 ~ 12022594 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2461053
ttttttttttttttttttgttaaattttttaccccttttttctccccaatttcgtggtatccaattgttgtagtagctactatcttgtctcattgctacaactcccgtacgggctcgggagagacgaaggttgaatgtcatgcgtcctccgatacacaacccatccagccgtactgcttcttaacacagcgcgcatccaacctggaagccagccacaccaatgtgtcggaggctacaccgtgcacctggcaaccttggctagcgcgcactgcgcccggcccgccacaggagtcgctggtgcgcgatgagacaaggacatccctaccgaccaagccctccctaacccggacgacgctaggccaattgtgcgtcgccccacggacctcccggtcgcggccggttacgacagagcctgggcgtgaacccagggactctgatggcacagctggcgctgcagtacagcgcccttaaccactgcgccacccgggaggccaccaCTTCCCATTTCGACAGTTTTTTCAGCACACTAAATTTTGTAACAAAAGCCATGTTGTAATGCCTCCGGCCCCATATCTCAGAAGTTCACATGTTTTCTCCACAGAATCTCTGTAGTGTCACAGGAGAATGCCATAATGTTGTATGTCTTGTGGGGTTGTCAACAAAACAACATGGTTTGCAGGCAGGAATACTTACACTTTTGAGGTCCAGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2461053 True 709 lncRNA 0.53 1 12021886 12022594

Neighbor

gene id symbol gene type direction distance location
LOC110509640 LOC106563068 coding upstream 37048 11979441 ~ 11984838 (+)
LOC110509639 NA coding upstream 60011 11955624 ~ 11961875 (+)
LOC110509638 NA coding upstream 70290 11948589 ~ 11951596 (+)
tmem167a tm167 coding upstream 96426 11915756 ~ 11926319 (+)
hapln1b hapln1 coding upstream 171577 11821247 ~ 11852482 (+)
LOC118945327 NA coding downstream 27848 12050442 ~ 12053419 (+)
wdr45 wdr45 coding downstream 90542 12113136 ~ 12116480 (+)
zgc:100918 LOC105015198 coding downstream 94050 12116644 ~ 12126226 (+)
LOC110509641 LOC106563065 coding downstream 105492 12128086 ~ 12142058 (+)
stc1l LOC106563064 coding downstream 119556 12142150 ~ 12144271 (+)
G2152259 NA non-coding upstream 16009 12005588 ~ 12005877 (+)
G2152213 xrcc4 non-coding upstream 107604 11908620 ~ 11914282 (+)
G2152201 NA non-coding upstream 133353 11886553 ~ 11888533 (+)
G2152443 NA non-coding downstream 1918 12024512 ~ 12024735 (+)
G2152484 NA non-coding downstream 23842 12046436 ~ 12046778 (+)
G2152499 NA non-coding downstream 32845 12055439 ~ 12055675 (+)
G2152532 NA non-coding downstream 121777 12144371 ~ 12145405 (+)
G2152556 NA non-coding downstream 127784 12150378 ~ 12150786 (+)
G2152150 NA other upstream 255535 11764224 ~ 11766351 (+)
G2151555 NA other upstream 655394 11359557 ~ 11432252 (+)
G2150729 NA other upstream 1559666 10461753 ~ 10462220 (+)
LOC110509604 LOC106562973 other upstream 1712807 10064167 ~ 10309768 (+)
G2149183 NA other upstream 2647374 9374000 ~ 9374512 (+)
G2152639 NA other downstream 278198 12300792 ~ 12307438 (+)
G2153316 NA other downstream 737286 12759880 ~ 12760490 (+)
G2154294 NA other downstream 1645695 13668289 ~ 13669170 (+)
G2154391 NA other downstream 1750114 13772708 ~ 13776134 (+)
G2154438 NA other downstream 1783419 13806013 ~ 13813970 (+)

Expression


Co-expression Network