G2152443


Basic Information

Item Value
gene id G2152443
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 12024512 ~ 12024735 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2461240
gcgagagagagagagtggacagGTGAAATGAGGCGTACTGATCCTTGTTATGGCTGCAAAAACACCCCACATCACACACCATTAGCCTTTAAATTACTGTCAAACAGATACGGCACGACATGAGCTGTCAACCTGGAAAACACACAGACTGCAATTAGTAAATATCATCCTCTGCAAGATGTCCCAATCGTCACtgacacaagcaaacacacaaacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2461240 True 224 lncRNA 0.45 1 12024512 12024735

Neighbor

gene id symbol gene type direction distance location
LOC110509640 LOC106563068 coding upstream 39674 11979441 ~ 11984838 (+)
LOC110509639 NA coding upstream 62637 11955624 ~ 11961875 (+)
LOC110509638 NA coding upstream 72916 11948589 ~ 11951596 (+)
tmem167a tm167 coding upstream 99052 11915756 ~ 11926319 (+)
hapln1b hapln1 coding upstream 174203 11821247 ~ 11852482 (+)
LOC118945327 NA coding downstream 25707 12050442 ~ 12053419 (+)
wdr45 wdr45 coding downstream 88401 12113136 ~ 12116480 (+)
zgc:100918 LOC105015198 coding downstream 91909 12116644 ~ 12126226 (+)
LOC110509641 LOC106563065 coding downstream 103351 12128086 ~ 12142058 (+)
stc1l LOC106563064 coding downstream 117415 12142150 ~ 12144271 (+)
G2152271 NA non-coding upstream 1918 12021886 ~ 12022594 (+)
G2152259 NA non-coding upstream 18635 12005588 ~ 12005877 (+)
G2152213 xrcc4 non-coding upstream 110230 11908620 ~ 11914282 (+)
G2152484 NA non-coding downstream 21701 12046436 ~ 12046778 (+)
G2152499 NA non-coding downstream 30704 12055439 ~ 12055675 (+)
G2152532 NA non-coding downstream 119636 12144371 ~ 12145405 (+)
G2152556 NA non-coding downstream 125643 12150378 ~ 12150786 (+)
G2152565 NA non-coding downstream 137191 12161926 ~ 12163449 (+)
G2152150 NA other upstream 258161 11764224 ~ 11766351 (+)
G2151555 NA other upstream 658020 11359557 ~ 11432252 (+)
G2150729 NA other upstream 1562292 10461753 ~ 10462220 (+)
LOC110509604 LOC106562973 other upstream 1715433 10064167 ~ 10309768 (+)
G2149183 NA other upstream 2650000 9374000 ~ 9374512 (+)
G2152639 NA other downstream 276057 12300792 ~ 12307438 (+)
G2153316 NA other downstream 735145 12759880 ~ 12760490 (+)
G2154294 NA other downstream 1643554 13668289 ~ 13669170 (+)
G2154391 NA other downstream 1747973 13772708 ~ 13776134 (+)
G2154438 NA other downstream 1781278 13806013 ~ 13813970 (+)

Expression


Co-expression Network