Gene
RNA
| Item | Value |
|---|---|
| gene id | G2152470 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 12038654 ~ 12038943 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2461267 | True | 290 | lncRNA | 0.45 | 1 | 12038654 | 12038943 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zcchc9 | zcchc9 | coding | downstream | 72350 | 11961963 ~ 11966304 (-) |
| atg10 | atg10 | coding | downstream | 92829 | 11940630 ~ 11945825 (-) |
| xrcc4 | xrcc4 | coding | downstream | 122770 | 11885691 ~ 11915884 (-) |
| vcanb | LOC106568264 | coding | downstream | 153658 | 11853329 ~ 11884996 (-) |
| LOC110509627 | LOC106563113 | coding | downstream | 383544 | 11644033 ~ 11655110 (-) |
| LOC110509644 | lage3 | coding | upstream | 87866 | 12126809 ~ 12127782 (-) |
| fgfr1b | LOC106563063 | coding | upstream | 111423 | 12150366 ~ 12178844 (-) |
| march5l | LOC106563060 | coding | upstream | 156155 | 12195098 ~ 12201043 (-) |
| npy8ar | LOC106563058 | coding | upstream | 198760 | 12237703 ~ 12263143 (-) |
| zgc:86599 | LOC106567989 | coding | upstream | 274198 | 12313141 ~ 12320957 (-) |
| G2152451 | NA | non-coding | downstream | 12094 | 12026348 ~ 12026560 (-) |
| G2152435 | NA | non-coding | downstream | 18667 | 12016682 ~ 12019987 (-) |
| G2152426 | NA | non-coding | downstream | 32315 | 12006075 ~ 12006339 (-) |
| G2152389 | NA | non-coding | downstream | 63035 | 11954532 ~ 11975619 (-) |
| G2152471 | NA | non-coding | upstream | 244 | 12039187 ~ 12039474 (-) |
| G2152511 | NA | non-coding | upstream | 25714 | 12064657 ~ 12064876 (-) |
| G2152514 | NA | non-coding | upstream | 27238 | 12066181 ~ 12066425 (-) |
| G2152515 | NA | non-coding | upstream | 28331 | 12067274 ~ 12067498 (-) |
| G2152834 | NA | non-coding | upstream | 66312 | 12105255 ~ 12105457 (-) |
| G2152107 | NA | other | downstream | 316175 | 11722072 ~ 11722479 (-) |
| LOC110509625 | LOC106568355 | other | downstream | 513502 | 11456618 ~ 11525214 (-) |
| LOC100135966 | rps27a | other | downstream | 794594 | 11241994 ~ 11244060 (-) |
| G2151771 | NA | other | downstream | 1044775 | 10993166 ~ 10993879 (-) |
| G2153174 | NA | other | upstream | 610233 | 12649176 ~ 12649495 (-) |
| G2153683 | NA | other | upstream | 1048510 | 13087453 ~ 13091356 (-) |
| G2154361 | LOC106563107 | other | upstream | 1689890 | 13728833 ~ 13731096 (-) |
| G2154418 | LOC106563033 | other | upstream | 1741716 | 13780659 ~ 13782254 (-) |
| G2154637 | NA | other | upstream | 1961582 | 14000525 ~ 14010167 (-) |
