G2152484


Basic Information

Item Value
gene id G2152484
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 12046436 ~ 12046778 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2461281
accataaacttgaacttcttccattttctaataattgcgccaacagttgttgccttctcaccaagctgtttgcctattgtcctgtagcccatcccagccttgtgcagatctacaattttatccctgatgtccttacacagctctctggtcttggccattgtggagaggttggagtctgctTGATTGAGTGTGtagacaggtgtattttatacaggtaacgagttcaaacaggtgcagttaagacaggtaatgagtggagaacaggagggcttcttaaagaaaaactaacaggtctgtgagagccggaattcttactggttggtaagtgttcaaatacttatgt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2461281 True 343 lncRNA 0.43 1 12046436 12046778

Neighbor

gene id symbol gene type direction distance location
LOC110509640 LOC106563068 coding upstream 61598 11979441 ~ 11984838 (+)
LOC110509639 NA coding upstream 84561 11955624 ~ 11961875 (+)
LOC110509638 NA coding upstream 94840 11948589 ~ 11951596 (+)
tmem167a tm167 coding upstream 120976 11915756 ~ 11926319 (+)
hapln1b hapln1 coding upstream 196127 11821247 ~ 11852482 (+)
LOC118945327 NA coding downstream 3664 12050442 ~ 12053419 (+)
wdr45 wdr45 coding downstream 66358 12113136 ~ 12116480 (+)
zgc:100918 LOC105015198 coding downstream 69866 12116644 ~ 12126226 (+)
LOC110509641 LOC106563065 coding downstream 81308 12128086 ~ 12142058 (+)
stc1l LOC106563064 coding downstream 95372 12142150 ~ 12144271 (+)
G2152443 NA non-coding upstream 21701 12024512 ~ 12024735 (+)
G2152271 NA non-coding upstream 23842 12021886 ~ 12022594 (+)
G2152259 NA non-coding upstream 40559 12005588 ~ 12005877 (+)
G2152499 NA non-coding downstream 8661 12055439 ~ 12055675 (+)
G2152532 NA non-coding downstream 97593 12144371 ~ 12145405 (+)
G2152556 NA non-coding downstream 103600 12150378 ~ 12150786 (+)
G2152565 NA non-coding downstream 115148 12161926 ~ 12163449 (+)
G2152591 NA non-coding downstream 169100 12215878 ~ 12216894 (+)
G2152150 NA other upstream 280085 11764224 ~ 11766351 (+)
G2151555 NA other upstream 679944 11359557 ~ 11432252 (+)
G2150729 NA other upstream 1584216 10461753 ~ 10462220 (+)
LOC110509604 LOC106562973 other upstream 1737357 10064167 ~ 10309768 (+)
G2149183 NA other upstream 2671924 9374000 ~ 9374512 (+)
G2152639 NA other downstream 254014 12300792 ~ 12307438 (+)
G2153316 NA other downstream 713102 12759880 ~ 12760490 (+)
G2154294 NA other downstream 1621511 13668289 ~ 13669170 (+)
G2154391 NA other downstream 1725930 13772708 ~ 13776134 (+)
G2154438 NA other downstream 1759235 13806013 ~ 13813970 (+)

Expression


Co-expression Network