Gene
RNA
| Item | Value |
|---|---|
| gene id | G2152515 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 12067274 ~ 12067498 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: chromo domain-containing protein cec-1-like |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2461312 | True | 225 | lncRNA | 0.64 | 1 | 12067274 | 12067498 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zcchc9 | zcchc9 | coding | downstream | 100970 | 11961963 ~ 11966304 (-) |
| atg10 | atg10 | coding | downstream | 121449 | 11940630 ~ 11945825 (-) |
| xrcc4 | xrcc4 | coding | downstream | 151390 | 11885691 ~ 11915884 (-) |
| vcanb | LOC106568264 | coding | downstream | 182278 | 11853329 ~ 11884996 (-) |
| LOC110509627 | LOC106563113 | coding | downstream | 412164 | 11644033 ~ 11655110 (-) |
| LOC110509644 | lage3 | coding | upstream | 59311 | 12126809 ~ 12127782 (-) |
| fgfr1b | LOC106563063 | coding | upstream | 82868 | 12150366 ~ 12178844 (-) |
| march5l | LOC106563060 | coding | upstream | 127600 | 12195098 ~ 12201043 (-) |
| npy8ar | LOC106563058 | coding | upstream | 170205 | 12237703 ~ 12263143 (-) |
| zgc:86599 | LOC106567989 | coding | upstream | 245643 | 12313141 ~ 12320957 (-) |
| G2152514 | NA | non-coding | downstream | 849 | 12066181 ~ 12066425 (-) |
| G2152511 | NA | non-coding | downstream | 2398 | 12064657 ~ 12064876 (-) |
| G2152471 | NA | non-coding | downstream | 27800 | 12039187 ~ 12039474 (-) |
| G2152470 | NA | non-coding | downstream | 28331 | 12038654 ~ 12038943 (-) |
| G2152451 | NA | non-coding | downstream | 40714 | 12026348 ~ 12026560 (-) |
| G2152834 | NA | non-coding | upstream | 37757 | 12105255 ~ 12105457 (-) |
| G2152843 | wdr45 | non-coding | upstream | 45699 | 12113197 ~ 12116497 (-) |
| G2152855 | LOC106563065 | non-coding | upstream | 72156 | 12139654 ~ 12140418 (-) |
| G2152858 | NA | non-coding | upstream | 78086 | 12145584 ~ 12146169 (-) |
| G2152107 | NA | other | downstream | 344795 | 11722072 ~ 11722479 (-) |
| LOC110509625 | LOC106568355 | other | downstream | 542122 | 11456618 ~ 11525214 (-) |
| LOC100135966 | rps27a | other | downstream | 823214 | 11241994 ~ 11244060 (-) |
| G2151771 | NA | other | downstream | 1073395 | 10993166 ~ 10993879 (-) |
| G2153174 | NA | other | upstream | 581678 | 12649176 ~ 12649495 (-) |
| G2153683 | NA | other | upstream | 1019955 | 13087453 ~ 13091356 (-) |
| G2154361 | LOC106563107 | other | upstream | 1661335 | 13728833 ~ 13731096 (-) |
| G2154418 | LOC106563033 | other | upstream | 1713161 | 13780659 ~ 13782254 (-) |
| G2154637 | NA | other | upstream | 1933027 | 14000525 ~ 14010167 (-) |
