Gene
RNA
| Item | Value |
|---|---|
| gene id | G2152834 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 12105255 ~ 12105457 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2461655 | True | 203 | lncRNA | 0.49 | 1 | 12105255 | 12105457 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zcchc9 | zcchc9 | coding | downstream | 138951 | 11961963 ~ 11966304 (-) |
| atg10 | atg10 | coding | downstream | 159430 | 11940630 ~ 11945825 (-) |
| xrcc4 | xrcc4 | coding | downstream | 189371 | 11885691 ~ 11915884 (-) |
| vcanb | LOC106568264 | coding | downstream | 220259 | 11853329 ~ 11884996 (-) |
| LOC110509627 | LOC106563113 | coding | downstream | 450145 | 11644033 ~ 11655110 (-) |
| LOC110509644 | lage3 | coding | upstream | 21352 | 12126809 ~ 12127782 (-) |
| fgfr1b | LOC106563063 | coding | upstream | 44909 | 12150366 ~ 12178844 (-) |
| march5l | LOC106563060 | coding | upstream | 89641 | 12195098 ~ 12201043 (-) |
| npy8ar | LOC106563058 | coding | upstream | 132246 | 12237703 ~ 12263143 (-) |
| zgc:86599 | LOC106567989 | coding | upstream | 207684 | 12313141 ~ 12320957 (-) |
| G2152515 | NA | non-coding | downstream | 37757 | 12067274 ~ 12067498 (-) |
| G2152514 | NA | non-coding | downstream | 38830 | 12066181 ~ 12066425 (-) |
| G2152511 | NA | non-coding | downstream | 40379 | 12064657 ~ 12064876 (-) |
| G2152471 | NA | non-coding | downstream | 65781 | 12039187 ~ 12039474 (-) |
| G2152470 | NA | non-coding | downstream | 66312 | 12038654 ~ 12038943 (-) |
| G2152843 | wdr45 | non-coding | upstream | 7740 | 12113197 ~ 12116497 (-) |
| G2152855 | LOC106563065 | non-coding | upstream | 34197 | 12139654 ~ 12140418 (-) |
| G2152858 | NA | non-coding | upstream | 40127 | 12145584 ~ 12146169 (-) |
| G2152880 | NA | non-coding | upstream | 87792 | 12193249 ~ 12193554 (-) |
| G2152107 | NA | other | downstream | 382776 | 11722072 ~ 11722479 (-) |
| LOC110509625 | LOC106568355 | other | downstream | 580103 | 11456618 ~ 11525214 (-) |
| LOC100135966 | rps27a | other | downstream | 861195 | 11241994 ~ 11244060 (-) |
| G2151771 | NA | other | downstream | 1111376 | 10993166 ~ 10993879 (-) |
| G2153174 | NA | other | upstream | 543719 | 12649176 ~ 12649495 (-) |
| G2153683 | NA | other | upstream | 981996 | 13087453 ~ 13091356 (-) |
| G2154361 | LOC106563107 | other | upstream | 1623376 | 13728833 ~ 13731096 (-) |
| G2154418 | LOC106563033 | other | upstream | 1675202 | 13780659 ~ 13782254 (-) |
| G2154637 | NA | other | upstream | 1895068 | 14000525 ~ 14010167 (-) |
