G2152937


Basic Information

Item Value
gene id G2152937
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 12297891 ~ 12304589 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2461762
AGCTATCTTTATTACTATTTGTTTTTGTGCATCTTTGGACAGTACTTGATTAAACGGTAATTGGTTAGTTATTGATACTATACTTTGTCGGGTGGTAACAGAGCTCCAGCAGTTGGATTCAATGTCCAGATAGCTAATCAATAACTGTACTGTCAAAACCTTGCTCATAAAATCTCATAGGTTGCTCATGAAGCAGCACGGCTAGCTAGACTGGGTAGTCCCTCACTTTAGTTAGTTAGCTTAATTAACGTTATCTGTCATTGCAGCTTTTTAGTCAACATGTTGAAATTTAAGTTACTAAAATCTGGCTTACTGTGAGGTCAATAACTTTGAATAACATCATCATGGGCTAACAAAATGCGCTGTTGTAAAAACAAGCTAACAAAGTTTACCTCCGGTTCTTCTTCTCATCTTTGCACTCTCTCCCTCAGAGTATGAACAGTTGCCCACgagtgttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2461762 True 458 lncRNA 0.38 2 12297891 12304589

Neighbor

gene id symbol gene type direction distance location
npy8ar LOC106563058 coding downstream 34748 12237703 ~ 12263143 (-)
march5l LOC106563060 coding downstream 96848 12195098 ~ 12201043 (-)
fgfr1b LOC106563063 coding downstream 119047 12150366 ~ 12178844 (-)
LOC110509644 lage3 coding downstream 170109 12126809 ~ 12127782 (-)
zcchc9 zcchc9 coding downstream 331587 11961963 ~ 11966304 (-)
zgc:86599 LOC106567989 coding upstream 8552 12313141 ~ 12320957 (-)
LOC110509322 LOC106568012 coding upstream 49086 12353675 ~ 12363879 (-)
gfra2b LOC106563053 coding upstream 252543 12557132 ~ 12627138 (-)
LOC110509362 NA coding upstream 421541 12726130 ~ 12726962 (-)
LOC110509658 LOC106563051 coding upstream 477255 12781844 ~ 12786031 (-)
G2152936 NA non-coding downstream 3017 12294657 ~ 12294874 (-)
G2152920 NA non-coding downstream 34346 12263261 ~ 12263545 (-)
G2152901 NA non-coding downstream 61589 12236070 ~ 12236302 (-)
G2152900 NA non-coding downstream 65756 12230377 ~ 12232135 (-)
G2152896 NA non-coding downstream 71734 12225948 ~ 12226157 (-)
G2152941 NA non-coding upstream 4270 12308859 ~ 12309089 (-)
G2152913 NA non-coding upstream 8128 12312717 ~ 12312911 (-)
G2152994 LOC101072524 non-coding upstream 87485 12392074 ~ 12392823 (-)
G2152996 LOC106563054 non-coding upstream 88336 12392925 ~ 12395321 (-)
G2153033 NA non-coding upstream 152864 12457453 ~ 12458594 (-)
atg10 atg10 other downstream 353738 11940630 ~ 11945825 (-)
G2152107 NA other downstream 575412 11722072 ~ 11722479 (-)
LOC110509625 LOC106568355 other downstream 772739 11456618 ~ 11525214 (-)
LOC100135966 rps27a other downstream 1053831 11241994 ~ 11244060 (-)
G2151771 NA other downstream 1304012 10993166 ~ 10993879 (-)
G2153174 NA other upstream 344587 12649176 ~ 12649495 (-)
G2153683 NA other upstream 782864 13087453 ~ 13091356 (-)
G2154361 LOC106563107 other upstream 1424244 13728833 ~ 13731096 (-)
G2154418 LOC106563033 other upstream 1476070 13780659 ~ 13782254 (-)
G2154637 NA other upstream 1695936 14000525 ~ 14010167 (-)

Expression


Co-expression Network