G2153173


Basic Information

Item Value
gene id G2153173
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 12647923 ~ 12648155 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2462004
ggtataaatacataggggataatgtggaagatgggtgacacctggaggggggtggaaacaagcacaaggacaggtaaaacagatcagggcgtaacaatatgttgaaacagcaggcccagggaggaggaagacagagtgaaggcacacagcaaacctttttgtttaatttttacttgttttcactTACACACACTTTTACTACCCTCGGGTCCAGTGGATCCAAACACCACATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2462004 True 233 lncRNA 0.45 1 12647923 12648155

Neighbor

gene id symbol gene type direction distance location
LOC110509656 NA coding upstream 202602 12438582 ~ 12445321 (+)
atp6v1b2 LOC106563054 coding upstream 253355 12377064 ~ 12394568 (+)
dusp11 dusp11 coding upstream 275576 12365542 ~ 12372347 (+)
tcf7l1a LOC106563056 coding upstream 294451 12328752 ~ 12353472 (+)
actr1 LOC106563059 coding upstream 433205 12206283 ~ 12214718 (+)
LOC110509661 LOC106563047 coding downstream 369898 13018053 ~ 13088171 (+)
LOC110509665 NA coding downstream 578252 13226407 ~ 13230321 (+)
arsb arsb coding downstream 586316 13234471 ~ 13259942 (+)
LOC110509667 LOC106563044 coding downstream 614511 13262666 ~ 13336582 (+)
LOC110509669 LOC106563041 coding downstream 729147 13377302 ~ 13442767 (+)
G2153161 NA non-coding upstream 9288 12638412 ~ 12638635 (+)
G2153156 NA non-coding upstream 11635 12636033 ~ 12636288 (+)
G2153150 NA non-coding upstream 16541 12631031 ~ 12631382 (+)
G2153148 NA non-coding upstream 17502 12630199 ~ 12630421 (+)
G2153147 NA non-coding upstream 18091 12629536 ~ 12629832 (+)
G2153175 NA non-coding downstream 1985 12650140 ~ 12650496 (+)
G2153177 NA non-coding downstream 3011 12651166 ~ 12651569 (+)
G2153212 NA non-coding downstream 25001 12673156 ~ 12673444 (+)
G2153307 NA non-coding downstream 99499 12747654 ~ 12747876 (+)
G2153310 NA non-coding downstream 103165 12751320 ~ 12759736 (+)
G2152639 NA other upstream 340485 12300792 ~ 12307438 (+)
G2152150 NA other upstream 881572 11764224 ~ 11766351 (+)
G2151555 NA other upstream 1281431 11359557 ~ 11432252 (+)
G2150729 NA other upstream 2185703 10461753 ~ 10462220 (+)
LOC110509604 LOC106562973 other upstream 2338844 10064167 ~ 10309768 (+)
G2153316 NA other downstream 111725 12759880 ~ 12760490 (+)
G2154294 NA other downstream 1020134 13668289 ~ 13669170 (+)
G2154391 NA other downstream 1124553 13772708 ~ 13776134 (+)
G2154438 NA other downstream 1157858 13806013 ~ 13813970 (+)
G2154512 NA other downstream 1285093 13915670 ~ 13935819 (+)

Expression


Co-expression Network