Gene
RNA
| Item | Value |
|---|---|
| gene id | G2153400 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 12847696 ~ 12848285 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2462242 | True | 590 | lncRNA | 0.37 | 1 | 12847696 | 12848285 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509656 | NA | coding | upstream | 402375 | 12438582 ~ 12445321 (+) |
| atp6v1b2 | LOC106563054 | coding | upstream | 453128 | 12377064 ~ 12394568 (+) |
| dusp11 | dusp11 | coding | upstream | 475349 | 12365542 ~ 12372347 (+) |
| tcf7l1a | LOC106563056 | coding | upstream | 494224 | 12328752 ~ 12353472 (+) |
| actr1 | LOC106563059 | coding | upstream | 632978 | 12206283 ~ 12214718 (+) |
| LOC110509661 | LOC106563047 | coding | downstream | 169768 | 13018053 ~ 13088171 (+) |
| LOC110509665 | NA | coding | downstream | 378122 | 13226407 ~ 13230321 (+) |
| arsb | arsb | coding | downstream | 386186 | 13234471 ~ 13259942 (+) |
| LOC110509667 | LOC106563044 | coding | downstream | 414381 | 13262666 ~ 13336582 (+) |
| LOC110509669 | LOC106563041 | coding | downstream | 529017 | 13377302 ~ 13442767 (+) |
| G2153310 | NA | non-coding | upstream | 87960 | 12751320 ~ 12759736 (+) |
| G2153307 | NA | non-coding | upstream | 99820 | 12747654 ~ 12747876 (+) |
| G2153212 | NA | non-coding | upstream | 174252 | 12673156 ~ 12673444 (+) |
| G2153177 | NA | non-coding | upstream | 196127 | 12651166 ~ 12651569 (+) |
| G2153175 | NA | non-coding | upstream | 197200 | 12650140 ~ 12650496 (+) |
| G2153402 | NA | non-coding | downstream | 10480 | 12858765 ~ 12859894 (+) |
| G2153459 | NA | non-coding | downstream | 97296 | 12945581 ~ 12945786 (+) |
| G2153473 | NA | non-coding | downstream | 124040 | 12972325 ~ 12972555 (+) |
| G2153480 | LOC106563050 | non-coding | downstream | 140814 | 12989099 ~ 13001821 (+) |
| G2153499 | NA | non-coding | downstream | 168567 | 13016852 ~ 13017074 (+) |
| G2153316 | NA | other | upstream | 87206 | 12759880 ~ 12760490 (+) |
| G2152639 | NA | other | upstream | 540258 | 12300792 ~ 12307438 (+) |
| G2152150 | NA | other | upstream | 1081345 | 11764224 ~ 11766351 (+) |
| G2151555 | NA | other | upstream | 1481204 | 11359557 ~ 11432252 (+) |
| G2150729 | NA | other | upstream | 2385476 | 10461753 ~ 10462220 (+) |
| G2154294 | NA | other | downstream | 820004 | 13668289 ~ 13669170 (+) |
| G2154391 | NA | other | downstream | 924423 | 13772708 ~ 13776134 (+) |
| G2154438 | NA | other | downstream | 957728 | 13806013 ~ 13813970 (+) |
| G2154512 | NA | other | downstream | 1084963 | 13915670 ~ 13935819 (+) |
| G2155696 | NA | other | downstream | 2170342 | 15018627 ~ 15093949 (+) |
