G2153499


Basic Information

Item Value
gene id G2153499
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 13016852 ~ 13017074 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2462347
accattcagtgaccactcgtgccctgtggatgggggtaTTGTAATCCTATTGTAAtcccaaaataatggcctgcccagcatttttatatatgaccctaagcatgatgggatgttcatTTCTTAAttaaccacacctgtgtggaagcacctgctttcaatatactttgtctTCCTCATTTACAGAAGTGTTTCCAATATTTTGCCAATTACCTGTGTATAGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2462347 True 223 lncRNA 0.40 1 13016852 13017074

Neighbor

gene id symbol gene type direction distance location
LOC110509656 NA coding upstream 571531 12438582 ~ 12445321 (+)
atp6v1b2 LOC106563054 coding upstream 622284 12377064 ~ 12394568 (+)
dusp11 dusp11 coding upstream 644505 12365542 ~ 12372347 (+)
tcf7l1a LOC106563056 coding upstream 663380 12328752 ~ 12353472 (+)
actr1 LOC106563059 coding upstream 802134 12206283 ~ 12214718 (+)
LOC110509661 LOC106563047 coding downstream 979 13018053 ~ 13088171 (+)
LOC110509665 NA coding downstream 209333 13226407 ~ 13230321 (+)
arsb arsb coding downstream 217397 13234471 ~ 13259942 (+)
LOC110509667 LOC106563044 coding downstream 245592 13262666 ~ 13336582 (+)
LOC110509669 LOC106563041 coding downstream 360228 13377302 ~ 13442767 (+)
G2153480 LOC106563050 non-coding upstream 15031 12989099 ~ 13001821 (+)
G2153473 NA non-coding upstream 44297 12972325 ~ 12972555 (+)
G2153459 NA non-coding upstream 71066 12945581 ~ 12945786 (+)
G2153402 NA non-coding upstream 156958 12858765 ~ 12859894 (+)
G2153400 NA non-coding upstream 168567 12847696 ~ 12848285 (+)
G2153518 NA non-coding downstream 32710 13049784 ~ 13050291 (+)
G2153478 NA non-coding downstream 72457 13089531 ~ 13091341 (+)
G2153543 LOC106563046 non-coding downstream 74615 13091689 ~ 13093888 (+)
G2153550 NA non-coding downstream 149353 13166427 ~ 13167406 (+)
G2153582 bhmt non-coding downstream 150412 13167486 ~ 13170130 (+)
G2153316 NA other upstream 256362 12759880 ~ 12760490 (+)
G2152639 NA other upstream 709414 12300792 ~ 12307438 (+)
G2152150 NA other upstream 1250501 11764224 ~ 11766351 (+)
G2151555 NA other upstream 1650360 11359557 ~ 11432252 (+)
G2150729 NA other upstream 2554632 10461753 ~ 10462220 (+)
G2154294 NA other downstream 651215 13668289 ~ 13669170 (+)
G2154391 NA other downstream 755634 13772708 ~ 13776134 (+)
G2154438 NA other downstream 788939 13806013 ~ 13813970 (+)
G2154512 NA other downstream 916174 13915670 ~ 13935819 (+)
G2155696 NA other downstream 2001553 15018627 ~ 15093949 (+)

Expression


Co-expression Network