G2153478


Basic Information

Item Value
gene id G2153478
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 13089531 ~ 13091341 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2462324
gtctgaatactttccgaatgcactgtattttcaacaacaacaaaaaattgcgGAGTCTGGCTAGCATTCCATAGGAGGGGATGTTGAATATGGTCGGTTATTTTGCTTCAGGGTTTTCTTCCATCACAGACTTTGAAAAGGTAAAAGGAAACGCtcattttctacattttatttGGTGCAAAGTTCAGTTCAGTCATCCAGAGTCGTTCGCTGGTGGATGTTTTGCTATTATTGTTTACTCTTCGCTGTCGTCGCCACACATTCAGGTCTGTTTTTGAACTATTCTACATCTACTGGTTTCTTATTCCGTTATGACTACAGTACTACTATTGCTCTGTTTACTATGGAGATATCAATGTCAGCCAAAAGGACAGTCAGATGATCAGATGTCATGGAAATGGAGAGTCAGACTCACTGGTCTTTACAGCGTTTCACTGGACTCTATGGCCGTTCGCTCTGAGGCCCCATCTGACACTGGACTAGGActaagggtcagaggtcagacagATGACCTCCCAGTCACTTTATGAAACGCTCCCAATGTCCTCCCTCCTATCACAATGTTACCATGGAGATTGAAGAAGAATCTGGCATATTGTCCAAGATTGAGAACAGATCTTGGACAACCTTCTATACTAAATGAGCAATACAAAGAGGGAGCATCCAGAAGAAAAATAAACATGTTGAAGTCTCACTTTCAGTGCAATGATTGATTGGTTCATGGTGTTTTCCCTTTATTTATTATTCCAGATATATTATAACCACAGATTTTAATGAGAATTGTATCAAACAAAGATGTTTGTCACTTActcttgtcttttttttttatgtctgaTATGTGGGTATCAAGGTTGGTTGGTTTTTTTTAGGTATGAGAAAAAAAGACTGGCAATATGTTTGAACTATTTAAAAAGCTAATGGATTTATAGTAATTTGTGCATAGCAGGTGAGGATTGCAGAGAGACTTTCTTTCCTTTTGCCAAAATATTTTCCTGTACAGAATGTGAATTTTGTTGACGTTGCCTTTGGTACAAATATGGATCAATGGTAACTAACTACGGTACTTTTGTGGGATTTACTATTGCCAAAAATCTGTGATAATGTATAAAAAATTATAACTATATGTATATGTGAAGAACACTATTTAAAGGTCAACTTTGGGCACGAAAAGTGGTCAGACACTGCCCCTTTCTCAAACAGTAATGGGGTGTGCCTTTGGTGGTTTGTTGATGTGTCGTGCGCTGCGACCGATTTGTTTTTGGATGGAAGCTGTAGAGATTGGTAAGAACACTTCTTTAGCCAAATATCTTATTCATCCAATTATTTAAGTTAAGCATTGACCTGGTATGATGGCGCAGTGATCAGTTATACAGTTTAAAGCcattatttttcagtttttgcccAACGTCGACCTTTAAGGGCTTGTTGTTGGTTCTAGTATCTTTGGGAGACTTAAATGGGGTGTCTGAGTGAGTTGGCTTTATAGCGTTTCATTTATGATCTGAACTTCTACAGTTTGAAAGGGGAGAAAGGTTTGAGTAATAATTTTAAATGTTGATTATGCCACATGCTTAAACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2462324 True 1578 lncRNA 0.38 2 13089531 13091341

Neighbor

gene id symbol gene type direction distance location
LOC110509661 LOC106563047 coding upstream 1360 13018053 ~ 13088171 (+)
LOC110509656 NA coding upstream 644210 12438582 ~ 12445321 (+)
atp6v1b2 LOC106563054 coding upstream 694963 12377064 ~ 12394568 (+)
dusp11 dusp11 coding upstream 717184 12365542 ~ 12372347 (+)
tcf7l1a LOC106563056 coding upstream 736059 12328752 ~ 12353472 (+)
LOC110509665 NA coding downstream 135066 13226407 ~ 13230321 (+)
arsb arsb coding downstream 143130 13234471 ~ 13259942 (+)
LOC110509667 LOC106563044 coding downstream 171325 13262666 ~ 13336582 (+)
LOC110509669 LOC106563041 coding downstream 285961 13377302 ~ 13442767 (+)
LOC110509670 tbca coding downstream 391765 13483106 ~ 13493733 (+)
G2153518 NA non-coding upstream 39240 13049784 ~ 13050291 (+)
G2153499 NA non-coding upstream 72457 13016852 ~ 13017074 (+)
G2153480 LOC106563050 non-coding upstream 87710 12989099 ~ 13001821 (+)
G2153473 NA non-coding upstream 116976 12972325 ~ 12972555 (+)
G2153459 NA non-coding upstream 143745 12945581 ~ 12945786 (+)
G2153543 LOC106563046 non-coding downstream 348 13091689 ~ 13093888 (+)
G2153550 NA non-coding downstream 75086 13166427 ~ 13167406 (+)
G2153582 bhmt non-coding downstream 76145 13167486 ~ 13170130 (+)
G2153583 NA non-coding downstream 89746 13181087 ~ 13181518 (+)
G2153767 NA non-coding downstream 99731 13191072 ~ 13191363 (+)
G2153316 NA other upstream 329041 12759880 ~ 12760490 (+)
G2152639 NA other upstream 782093 12300792 ~ 12307438 (+)
G2152150 NA other upstream 1323180 11764224 ~ 11766351 (+)
G2151555 NA other upstream 1723039 11359557 ~ 11432252 (+)
G2150729 NA other upstream 2627311 10461753 ~ 10462220 (+)
G2154294 NA other downstream 576948 13668289 ~ 13669170 (+)
G2154391 NA other downstream 681367 13772708 ~ 13776134 (+)
G2154438 NA other downstream 714672 13806013 ~ 13813970 (+)
G2154512 NA other downstream 841907 13915670 ~ 13935819 (+)
G2155696 NA other downstream 1927286 15018627 ~ 15093949 (+)

Expression


Co-expression Network