Gene
RNA
| Item | Value |
|---|---|
| gene id | G2153550 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 13166427 ~ 13167406 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| betaine--homocysteine S-methyltransferase 1 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2462398 | True | 956 | lncRNA | 0.42 | 2 | 13166427 | 13167406 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509661 | LOC106563047 | coding | upstream | 78256 | 13018053 ~ 13088171 (+) |
| LOC110509656 | NA | coding | upstream | 721106 | 12438582 ~ 12445321 (+) |
| atp6v1b2 | LOC106563054 | coding | upstream | 771859 | 12377064 ~ 12394568 (+) |
| dusp11 | dusp11 | coding | upstream | 794080 | 12365542 ~ 12372347 (+) |
| tcf7l1a | LOC106563056 | coding | upstream | 812955 | 12328752 ~ 12353472 (+) |
| LOC110509665 | NA | coding | downstream | 59001 | 13226407 ~ 13230321 (+) |
| arsb | arsb | coding | downstream | 67065 | 13234471 ~ 13259942 (+) |
| LOC110509667 | LOC106563044 | coding | downstream | 95260 | 13262666 ~ 13336582 (+) |
| LOC110509669 | LOC106563041 | coding | downstream | 209896 | 13377302 ~ 13442767 (+) |
| LOC110509670 | tbca | coding | downstream | 315700 | 13483106 ~ 13493733 (+) |
| G2153543 | LOC106563046 | non-coding | upstream | 72539 | 13091689 ~ 13093888 (+) |
| G2153478 | NA | non-coding | upstream | 75086 | 13089531 ~ 13091341 (+) |
| G2153518 | NA | non-coding | upstream | 116136 | 13049784 ~ 13050291 (+) |
| G2153499 | NA | non-coding | upstream | 149353 | 13016852 ~ 13017074 (+) |
| G2153480 | LOC106563050 | non-coding | upstream | 164606 | 12989099 ~ 13001821 (+) |
| G2153582 | bhmt | non-coding | downstream | 80 | 13167486 ~ 13170130 (+) |
| G2153583 | NA | non-coding | downstream | 13681 | 13181087 ~ 13181518 (+) |
| G2153767 | NA | non-coding | downstream | 23666 | 13191072 ~ 13191363 (+) |
| G2153316 | NA | other | upstream | 405937 | 12759880 ~ 12760490 (+) |
| G2152639 | NA | other | upstream | 858989 | 12300792 ~ 12307438 (+) |
| G2152150 | NA | other | upstream | 1400076 | 11764224 ~ 11766351 (+) |
| G2151555 | NA | other | upstream | 1799935 | 11359557 ~ 11432252 (+) |
| G2150729 | NA | other | upstream | 2704207 | 10461753 ~ 10462220 (+) |
| G2154294 | NA | other | downstream | 500883 | 13668289 ~ 13669170 (+) |
| G2154391 | NA | other | downstream | 605302 | 13772708 ~ 13776134 (+) |
| G2154438 | NA | other | downstream | 638607 | 13806013 ~ 13813970 (+) |
| G2154512 | NA | other | downstream | 765842 | 13915670 ~ 13935819 (+) |
| G2155696 | NA | other | downstream | 1851221 | 15018627 ~ 15093949 (+) |
