G2154008


Basic Information

Item Value
gene id G2154008
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 13635803 ~ 13636156 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2462897
GTTCAGGCTGGTTTCTCTGGTGTTTGCCGAGGTGAGCCATGACCTGTCCAGGTTCACAGCCGTCACAGGTGTCTGTACCAGAGTGGATGTGGAAGGAGAGAACAGTCTCTCCCATCTTCACTTCATCCCCATGGGTCAGAGGGCAAGGGTCACACTTTGCTTTGGGCTGAAGGATTCGGTTGCCATTGAGGACAGTTCCATTCTGGCTTCCCTGGTCCACTAGCATGTAGCACTGTTGGTCCTGGTCAAAGTACACCTCTGCATGAAACTGggatta

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2462897 True 277 lncRNA 0.53 2 13635803 13636156

Neighbor

gene id symbol gene type direction distance location
LOC110509671 LOC106563039 coding upstream 131774 13498470 ~ 13504029 (+)
LOC110509670 tbca coding upstream 142070 13483106 ~ 13493733 (+)
LOC110509669 LOC106563041 coding upstream 193036 13377302 ~ 13442767 (+)
LOC110509667 LOC106563044 coding upstream 299221 13262666 ~ 13336582 (+)
arsb arsb coding upstream 375861 13234471 ~ 13259942 (+)
crf-bp crf-bp coding downstream 42357 13678513 ~ 13697486 (+)
LOC110509673 LOC106563107 coding downstream 92656 13728812 ~ 13731111 (+)
LOC110509676 NA coding downstream 109257 13745413 ~ 13747459 (+)
LOC110509678 LOC106563033 coding downstream 143243 13779399 ~ 13782705 (+)
LOC110509328 LOC106563105 coding downstream 304031 13940187 ~ 13942428 (+)
G2153986 NA non-coding upstream 39347 13595635 ~ 13596456 (+)
LOC110509665 NA non-coding upstream 405677 13226407 ~ 13230321 (+)
G2153767 NA non-coding upstream 444440 13191072 ~ 13191363 (+)
G2153583 NA non-coding upstream 454285 13181087 ~ 13181518 (+)
G2154296 NA non-coding downstream 33625 13669781 ~ 13670032 (+)
G2154299 NA non-coding downstream 35894 13672050 ~ 13672876 (+)
G2154300 NA non-coding downstream 36749 13672905 ~ 13673127 (+)
G2154303 NA non-coding downstream 38859 13675015 ~ 13675215 (+)
G2154311 NA non-coding downstream 49950 13686106 ~ 13687158 (+)
G2153316 NA other upstream 875313 12759880 ~ 12760490 (+)
G2152639 NA other upstream 1328365 12300792 ~ 12307438 (+)
G2152150 NA other upstream 1869452 11764224 ~ 11766351 (+)
G2151555 NA other upstream 2269311 11359557 ~ 11432252 (+)
G2150729 NA other upstream 3173583 10461753 ~ 10462220 (+)
G2154294 NA other downstream 32133 13668289 ~ 13669170 (+)
G2154391 NA other downstream 136552 13772708 ~ 13776134 (+)
G2154438 NA other downstream 169857 13806013 ~ 13813970 (+)
G2154512 NA other downstream 297092 13915670 ~ 13935819 (+)
G2155696 NA other downstream 1382471 15018627 ~ 15093949 (+)

Expression


Co-expression Network