G2154294


Basic Information

Item Value
gene id G2154294
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 13668289 ~ 13669170 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2463200
ctttgtcggattcttgtttgtgttattcatgcctgaaccagactatcgtcatgtttgctgcaaccttgtcctgtcctgtcggaatctgccggtccatctgagcctacgtatgttttgttattaaagaagccctgtttacgttagttcgcttttgggtcctcattcacgcaccataacagaagaatccgaccaagaatggacccagcgacttcggatcctctccactcagccgtcgagatccagggagcgatgctaggcagacacgagcaggaattgtctgctgctcgacatgccgttgagaccctggccacccaagtctccaacctcacagaacaggttcaccatctccgcctcaatccaccggccacttccagggctttcgaatctccggagcccagaatcaataacccgccgtgttactctggggagcccactgaatgccgctcgttcctcacccagtgtgatattgtgttttctctccagcccaacacttactccaggagcactgctcgtgtcgcctacgtcatttctctccttactggacgggctcgtgagtggggcacggcaatctgggaggcaagggctgagtgtactaaccagtatcaggactttaaggaggagatgatacgggtttttgatcgatctgtttttggggaggaggcttccagggtcctgtcttccctatgtcaaggtaatcgatccataacagactactctattgagtttcgcactcttgctgcctccagtggctggaacgagccggctttgctcgctcgttttctggagggtctccgcgcagaggtaaaggatgagattctctcccgggaggttccttccagcgtggattccttgattgaactcgctattcgcattgagcgacgg

Function

NR:

description
PREDICTED: protein LDOC1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2463200 True 882 TUCP 0.53 1 13668289 13669170

Neighbor

gene id symbol gene type direction distance location
LOC110509671 LOC106563039 coding upstream 164260 13498470 ~ 13504029 (+)
LOC110509670 tbca coding upstream 174556 13483106 ~ 13493733 (+)
LOC110509669 LOC106563041 coding upstream 225522 13377302 ~ 13442767 (+)
LOC110509667 LOC106563044 coding upstream 331707 13262666 ~ 13336582 (+)
arsb arsb coding upstream 408347 13234471 ~ 13259942 (+)
crf-bp crf-bp coding downstream 9343 13678513 ~ 13697486 (+)
LOC110509673 LOC106563107 coding downstream 59642 13728812 ~ 13731111 (+)
LOC110509676 NA coding downstream 76243 13745413 ~ 13747459 (+)
LOC110509678 LOC106563033 coding downstream 110229 13779399 ~ 13782705 (+)
LOC110509328 LOC106563105 coding downstream 271017 13940187 ~ 13942428 (+)
G2154008 NA non-coding upstream 32133 13635803 ~ 13636156 (+)
G2153986 NA non-coding upstream 71833 13595635 ~ 13596456 (+)
LOC110509665 NA non-coding upstream 438163 13226407 ~ 13230321 (+)
G2153767 NA non-coding upstream 476926 13191072 ~ 13191363 (+)
G2154296 NA non-coding downstream 611 13669781 ~ 13670032 (+)
G2154299 NA non-coding downstream 2880 13672050 ~ 13672876 (+)
G2154300 NA non-coding downstream 3735 13672905 ~ 13673127 (+)
G2154303 NA non-coding downstream 5845 13675015 ~ 13675215 (+)
G2154311 NA non-coding downstream 16936 13686106 ~ 13687158 (+)
G2153316 NA other upstream 907799 12759880 ~ 12760490 (+)
G2152639 NA other upstream 1360851 12300792 ~ 12307438 (+)
G2152150 NA other upstream 1901938 11764224 ~ 11766351 (+)
G2151555 NA other upstream 2301797 11359557 ~ 11432252 (+)
G2150729 NA other upstream 3206069 10461753 ~ 10462220 (+)
G2154391 NA other downstream 103538 13772708 ~ 13776134 (+)
G2154438 NA other downstream 136843 13806013 ~ 13813970 (+)
G2154512 NA other downstream 264078 13915670 ~ 13935819 (+)
G2155696 NA other downstream 1349457 15018627 ~ 15093949 (+)
G2157602 NA other downstream 2681547 16350717 ~ 16353665 (+)

Expression


Co-expression Network