Gene
RNA
| Item | Value |
|---|---|
| gene id | G2154296 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 13669781 ~ 13670032 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Retrotransposable element Tf2 protein type 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2463202 | True | 252 | lncRNA | 0.52 | 1 | 13669781 | 13670032 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509671 | LOC106563039 | coding | upstream | 165752 | 13498470 ~ 13504029 (+) |
| LOC110509670 | tbca | coding | upstream | 176048 | 13483106 ~ 13493733 (+) |
| LOC110509669 | LOC106563041 | coding | upstream | 227014 | 13377302 ~ 13442767 (+) |
| LOC110509667 | LOC106563044 | coding | upstream | 333199 | 13262666 ~ 13336582 (+) |
| arsb | arsb | coding | upstream | 409839 | 13234471 ~ 13259942 (+) |
| crf-bp | crf-bp | coding | downstream | 8481 | 13678513 ~ 13697486 (+) |
| LOC110509673 | LOC106563107 | coding | downstream | 58780 | 13728812 ~ 13731111 (+) |
| LOC110509676 | NA | coding | downstream | 75381 | 13745413 ~ 13747459 (+) |
| LOC110509678 | LOC106563033 | coding | downstream | 109367 | 13779399 ~ 13782705 (+) |
| LOC110509328 | LOC106563105 | coding | downstream | 270155 | 13940187 ~ 13942428 (+) |
| G2154008 | NA | non-coding | upstream | 33625 | 13635803 ~ 13636156 (+) |
| G2153986 | NA | non-coding | upstream | 73325 | 13595635 ~ 13596456 (+) |
| LOC110509665 | NA | non-coding | upstream | 439655 | 13226407 ~ 13230321 (+) |
| G2153767 | NA | non-coding | upstream | 478418 | 13191072 ~ 13191363 (+) |
| G2154299 | NA | non-coding | downstream | 2018 | 13672050 ~ 13672876 (+) |
| G2154300 | NA | non-coding | downstream | 2873 | 13672905 ~ 13673127 (+) |
| G2154303 | NA | non-coding | downstream | 4983 | 13675015 ~ 13675215 (+) |
| G2154311 | NA | non-coding | downstream | 16074 | 13686106 ~ 13687158 (+) |
| G2154312 | NA | non-coding | downstream | 18388 | 13688420 ~ 13689469 (+) |
| G2154294 | NA | other | upstream | 611 | 13668289 ~ 13669170 (+) |
| G2153316 | NA | other | upstream | 909291 | 12759880 ~ 12760490 (+) |
| G2152639 | NA | other | upstream | 1362343 | 12300792 ~ 12307438 (+) |
| G2152150 | NA | other | upstream | 1903430 | 11764224 ~ 11766351 (+) |
| G2151555 | NA | other | upstream | 2303289 | 11359557 ~ 11432252 (+) |
| G2154391 | NA | other | downstream | 102676 | 13772708 ~ 13776134 (+) |
| G2154438 | NA | other | downstream | 135981 | 13806013 ~ 13813970 (+) |
| G2154512 | NA | other | downstream | 263216 | 13915670 ~ 13935819 (+) |
| G2155696 | NA | other | downstream | 1348595 | 15018627 ~ 15093949 (+) |
| G2157602 | NA | other | downstream | 2680685 | 16350717 ~ 16353665 (+) |
