G2154299


Basic Information

Item Value
gene id G2154299
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 13672050 ~ 13672876 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2463205
cgcccacaactcgcttccttcgtctgcgaccgggctatctccttttcagagtagcctcgggtaccagcctccgctgttctcatctcagttcgccgagtccagcgtcccctccgctcaggcttttgtccaacgttgcgagcgcacctggaagagggtcaggtctgcactttgccgttatagggcgcagactgtgagggctgctaataagcgcagaactaagagtcctagatattgtcgcggtcagagagtttggctctccactcagaaccttccccttaagaccgcttctcgcaagttgaccccgcggttcattggtccgttccgtattgctcagatcattaatcctgtcgcagttcgacttcttcttccgcgatatcttcgtcgcgtccacccggtcttccatgtctcctgtgtcaagcccgttcttcgcgcccccgctcgtcttccccccccccccccatccttgtcgagggcgcacccatctacagggtccgtaggattttggacatgcgtcctcggggccgtggtcatcagtacctagtagattgggaggggtacggtcctgaggagaggagttgggttccctctcgggacgtgctggaccgtgcgctgatcaatgatttcctccgttgccgccaggtttcctcctcgagtgcgccaggaggcgctcggtgagtgggggggtactgtcatgtattgtcatgttgtgtcttgtttctgtcctttcccttcaccctgtctccctctgctggtcgttattaggttaccttttctccccctctttcccccagctgttccttgtctcctcctaactacctcgtcacccc

Function

NR:

description
PREDICTED: uncharacterized protein LOC109108415

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2463205 True 827 lncRNA 0.58 1 13672050 13672876

Neighbor

gene id symbol gene type direction distance location
LOC110509671 LOC106563039 coding upstream 168021 13498470 ~ 13504029 (+)
LOC110509670 tbca coding upstream 178317 13483106 ~ 13493733 (+)
LOC110509669 LOC106563041 coding upstream 229283 13377302 ~ 13442767 (+)
LOC110509667 LOC106563044 coding upstream 335468 13262666 ~ 13336582 (+)
arsb arsb coding upstream 412108 13234471 ~ 13259942 (+)
crf-bp crf-bp coding downstream 5637 13678513 ~ 13697486 (+)
LOC110509673 LOC106563107 coding downstream 55936 13728812 ~ 13731111 (+)
LOC110509676 NA coding downstream 72537 13745413 ~ 13747459 (+)
LOC110509678 LOC106563033 coding downstream 106523 13779399 ~ 13782705 (+)
LOC110509328 LOC106563105 coding downstream 267311 13940187 ~ 13942428 (+)
G2154296 NA non-coding upstream 2018 13669781 ~ 13670032 (+)
G2154008 NA non-coding upstream 35894 13635803 ~ 13636156 (+)
G2153986 NA non-coding upstream 75594 13595635 ~ 13596456 (+)
LOC110509665 NA non-coding upstream 441924 13226407 ~ 13230321 (+)
G2154300 NA non-coding downstream 29 13672905 ~ 13673127 (+)
G2154303 NA non-coding downstream 2139 13675015 ~ 13675215 (+)
G2154311 NA non-coding downstream 13230 13686106 ~ 13687158 (+)
G2154312 NA non-coding downstream 15544 13688420 ~ 13689469 (+)
G2154338 NA non-coding downstream 36266 13709142 ~ 13709357 (+)
G2154294 NA other upstream 2880 13668289 ~ 13669170 (+)
G2153316 NA other upstream 911560 12759880 ~ 12760490 (+)
G2152639 NA other upstream 1364612 12300792 ~ 12307438 (+)
G2152150 NA other upstream 1905699 11764224 ~ 11766351 (+)
G2151555 NA other upstream 2305558 11359557 ~ 11432252 (+)
G2154391 NA other downstream 99832 13772708 ~ 13776134 (+)
G2154438 NA other downstream 133137 13806013 ~ 13813970 (+)
G2154512 NA other downstream 260372 13915670 ~ 13935819 (+)
G2155696 NA other downstream 1345751 15018627 ~ 15093949 (+)
G2157602 NA other downstream 2677841 16350717 ~ 16353665 (+)

Expression


Co-expression Network