G2154311


Basic Information

Item Value
gene id G2154311
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 13686106 ~ 13687158 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2463217
aatatatctttattaaTTCCCATCAcatcctaactagaatatatctttattaaTTCCCATCACATCCTAACTAGTATATATCTTTATTAATTCCACCATCACCATCCTAactagaatatatctttattaaCCACAATCACCATCCTAAAtagaatatatctttattacCCACAATCACCATCCTAAATAGAATATATCTTTAACTCCACCATCACCATCCTAactagaatatatctttattaaccccaccatcaccatcctaactagaatatatctttattaaTTCCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2463217 True 290 lncRNA 0.29 2 13686106 13687158

Neighbor

gene id symbol gene type direction distance location
LOC110509671 LOC106563039 coding upstream 182077 13498470 ~ 13504029 (+)
LOC110509670 tbca coding upstream 192373 13483106 ~ 13493733 (+)
LOC110509669 LOC106563041 coding upstream 243339 13377302 ~ 13442767 (+)
LOC110509667 LOC106563044 coding upstream 349524 13262666 ~ 13336582 (+)
arsb arsb coding upstream 426164 13234471 ~ 13259942 (+)
LOC110509673 LOC106563107 coding downstream 41654 13728812 ~ 13731111 (+)
LOC110509676 NA coding downstream 58255 13745413 ~ 13747459 (+)
LOC110509678 LOC106563033 coding downstream 92241 13779399 ~ 13782705 (+)
LOC110509328 LOC106563105 coding downstream 253029 13940187 ~ 13942428 (+)
LOC110509680 LOC106563031 coding downstream 271475 13958633 ~ 13996453 (+)
G2154303 NA non-coding upstream 10891 13675015 ~ 13675215 (+)
G2154300 NA non-coding upstream 12979 13672905 ~ 13673127 (+)
G2154299 NA non-coding upstream 13230 13672050 ~ 13672876 (+)
G2154296 NA non-coding upstream 16074 13669781 ~ 13670032 (+)
G2154008 NA non-coding upstream 49950 13635803 ~ 13636156 (+)
G2154312 NA non-coding downstream 1262 13688420 ~ 13689469 (+)
G2154338 NA non-coding downstream 21984 13709142 ~ 13709357 (+)
G2154340 NA non-coding downstream 24335 13711493 ~ 13711700 (+)
G2154379 NA non-coding downstream 65166 13752324 ~ 13752674 (+)
G2154384 NA non-coding downstream 79118 13766276 ~ 13766569 (+)
G2154294 NA other upstream 16936 13668289 ~ 13669170 (+)
G2153316 NA other upstream 925616 12759880 ~ 12760490 (+)
G2152639 NA other upstream 1378668 12300792 ~ 12307438 (+)
G2152150 NA other upstream 1919755 11764224 ~ 11766351 (+)
G2151555 NA other upstream 2319614 11359557 ~ 11432252 (+)
G2154391 NA other downstream 85550 13772708 ~ 13776134 (+)
G2154438 NA other downstream 118855 13806013 ~ 13813970 (+)
G2154512 NA other downstream 246090 13915670 ~ 13935819 (+)
G2155696 NA other downstream 1331469 15018627 ~ 15093949 (+)
G2157602 NA other downstream 2663559 16350717 ~ 16353665 (+)

Expression


Co-expression Network