G2154340


Basic Information

Item Value
gene id G2154340
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 13711493 ~ 13711700 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2463252
taacaagtcaataacacagtaggaaaaaaggggagtctatatacattgtgtgcaaaaggcatgaaaaggtaggcgaataattacaattatgcagattaacactggagtgataaatgatcagatggttatgtacaggtagagatattggtgtgcaaaagagcagaaaaataaataaataaaaacagtatggggatgaggtaggtgaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2463252 True 208 lncRNA 0.34 1 13711493 13711700

Neighbor

gene id symbol gene type direction distance location
crf-bp crf-bp coding upstream 14007 13678513 ~ 13697486 (+)
LOC110509671 LOC106563039 coding upstream 207464 13498470 ~ 13504029 (+)
LOC110509670 tbca coding upstream 217760 13483106 ~ 13493733 (+)
LOC110509669 LOC106563041 coding upstream 268726 13377302 ~ 13442767 (+)
LOC110509667 LOC106563044 coding upstream 374911 13262666 ~ 13336582 (+)
LOC110509673 LOC106563107 coding downstream 17112 13728812 ~ 13731111 (+)
LOC110509676 NA coding downstream 33713 13745413 ~ 13747459 (+)
LOC110509678 LOC106563033 coding downstream 67699 13779399 ~ 13782705 (+)
LOC110509328 LOC106563105 coding downstream 228487 13940187 ~ 13942428 (+)
LOC110509680 LOC106563031 coding downstream 246933 13958633 ~ 13996453 (+)
G2154338 NA non-coding upstream 2136 13709142 ~ 13709357 (+)
G2154312 NA non-coding upstream 22024 13688420 ~ 13689469 (+)
G2154311 NA non-coding upstream 24335 13686106 ~ 13687158 (+)
G2154303 NA non-coding upstream 36278 13675015 ~ 13675215 (+)
G2154300 NA non-coding upstream 38366 13672905 ~ 13673127 (+)
G2154379 NA non-coding downstream 40624 13752324 ~ 13752674 (+)
G2154384 NA non-coding downstream 54576 13766276 ~ 13766569 (+)
G2154396 NA non-coding downstream 74815 13786515 ~ 13786715 (+)
G2154512 NA non-coding downstream 203970 13915670 ~ 13935819 (+)
G2154294 NA other upstream 42323 13668289 ~ 13669170 (+)
G2153316 NA other upstream 951003 12759880 ~ 12760490 (+)
G2152639 NA other upstream 1404055 12300792 ~ 12307438 (+)
G2152150 NA other upstream 1945142 11764224 ~ 11766351 (+)
G2151555 NA other upstream 2345001 11359557 ~ 11432252 (+)
G2154391 NA other downstream 61008 13772708 ~ 13776134 (+)
G2154438 NA other downstream 94313 13806013 ~ 13813970 (+)
G2155696 NA other downstream 1306927 15018627 ~ 15093949 (+)
G2157602 NA other downstream 2639017 16350717 ~ 16353665 (+)

Expression


Co-expression Network