G2154379


Basic Information

Item Value
gene id G2154379
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 13752324 ~ 13752674 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2463303
TAAAATGTGTCCTTTAATGCAGAAGGCTAGTTGCTTGAGGACTCTCAGGTGCTTTTCTCCTGCTCTGTTTGTCTTTCTTCAGGTGGAAAGGAGGAATGGAATGGATAGGATTGGTGGTGACGAGGGATGGTAtgtgaggacagagaagagaacgGGAAGTAGCAATGTTATCTGACCTTTTGTCTTAAGATCATAATAGAAAAAAAAGTATTGTTTATTGTAGAACTCATTTGGTCAACTACCTGAAATTATCGAcatgtttgagtgtgtgtatatgtgtgtgtgtgtgcgttaaaaTGTATTACTCAATATTTCAGCAAATCACAATGCGTCCATTATTTGAAATCCTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2463303 True 351 lncRNA 0.38 1 13752324 13752674

Neighbor

gene id symbol gene type direction distance location
LOC110509676 NA coding upstream 4865 13745413 ~ 13747459 (+)
LOC110509673 LOC106563107 coding upstream 21213 13728812 ~ 13731111 (+)
crf-bp crf-bp coding upstream 54838 13678513 ~ 13697486 (+)
LOC110509671 LOC106563039 coding upstream 248295 13498470 ~ 13504029 (+)
LOC110509670 tbca coding upstream 258591 13483106 ~ 13493733 (+)
LOC110509678 LOC106563033 coding downstream 26725 13779399 ~ 13782705 (+)
LOC110509328 LOC106563105 coding downstream 187513 13940187 ~ 13942428 (+)
LOC110509680 LOC106563031 coding downstream 205959 13958633 ~ 13996453 (+)
atp6v1g1 LOC106563029 coding downstream 247580 14000254 ~ 14010168 (+)
slc31a1 LOC106563027 coding downstream 262368 14015042 ~ 14028322 (+)
G2154340 NA non-coding upstream 40624 13711493 ~ 13711700 (+)
G2154338 NA non-coding upstream 42967 13709142 ~ 13709357 (+)
G2154312 NA non-coding upstream 62855 13688420 ~ 13689469 (+)
G2154311 NA non-coding upstream 65166 13686106 ~ 13687158 (+)
G2154303 NA non-coding upstream 77109 13675015 ~ 13675215 (+)
G2154384 NA non-coding downstream 13602 13766276 ~ 13766569 (+)
G2154396 NA non-coding downstream 33841 13786515 ~ 13786715 (+)
G2154512 NA non-coding downstream 162996 13915670 ~ 13935819 (+)
G2154533 NA non-coding downstream 193795 13946469 ~ 13981651 (+)
G2154294 NA other upstream 83154 13668289 ~ 13669170 (+)
G2153316 NA other upstream 991834 12759880 ~ 12760490 (+)
G2152639 NA other upstream 1444886 12300792 ~ 12307438 (+)
G2152150 NA other upstream 1985973 11764224 ~ 11766351 (+)
G2151555 NA other upstream 2385832 11359557 ~ 11432252 (+)
G2154391 NA other downstream 20034 13772708 ~ 13776134 (+)
G2154438 NA other downstream 53339 13806013 ~ 13813970 (+)
G2155696 NA other downstream 1265953 15018627 ~ 15093949 (+)
G2157602 NA other downstream 2598043 16350717 ~ 16353665 (+)

Expression


Co-expression Network