G2154391


Basic Information

Item Value
gene id G2154391
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 13772708 ~ 13776134 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2463318
atccagtcatatatcaattacaccaccatgtcctacagtattcacccaatccagtcatatatcaattacaccaccatgttatacagtattcacccaatccagtcatatatcaattacaccaccatgtcctacagtattcacccaatccagtcatatatcaattacaccaccatgtcctacagtattcacccaatccagtcatatatcaattacaccaccatgtcctacagtattcacccaatccagtcatatatcaattacaccatgtcctacagtattcacccaatccagtcatatatcaattacaccaccatgtccTACAGTATTCACCCAATCCAGTCATATATCAATTACACCACCATGTTGTACAGTATTCACCCAATCCAGTCATATATCAATTACACCaccatgtcctacagtat
>TU2463316
acagtattcacccaatccagtcatatatcaattacaccaccatgtgtacagtattcacccaatccagtcatatatcaattacaccaccttgtcctacagtattcacccaatccagtcatatatcaattacaccaccatgtcctacagtattcacccaatccagtcatatatcaattacaccaccatgtcctacagtattcaCCCAATCCAGTCATATATCAATTACGCCACCATGTTGTACAGTATTCACCCAATCCAGTCATATATCAATTACACCACCATGTTGTACAGTATTCACCCAATCCAGTCATATATCAATTACACCaccatgtctacagtattcacccaatccagtcatatatcaattacaccaccatgtgtacagtattcacccaatccagtcatatatcaattacaccaccatgtcctacagtattcacccaatccagtcatatatcaattacaccaccatgtcctacagtattcacccaatccagtcatatatcaattacaccaccatgtcctac

Function

NR:

description
uncharacterized protein LOC109880564

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2463318 False 422 TUCP 0.38 2 13772708 13774088
TU2463316 True 527 TUCP 0.39 2 13773747 13776134

Neighbor

gene id symbol gene type direction distance location
LOC110509676 NA coding upstream 25249 13745413 ~ 13747459 (+)
LOC110509673 LOC106563107 coding upstream 41597 13728812 ~ 13731111 (+)
crf-bp crf-bp coding upstream 75222 13678513 ~ 13697486 (+)
LOC110509671 LOC106563039 coding upstream 268679 13498470 ~ 13504029 (+)
LOC110509670 tbca coding upstream 278975 13483106 ~ 13493733 (+)
LOC110509678 LOC106563033 coding downstream 3265 13779399 ~ 13782705 (+)
LOC110509328 LOC106563105 coding downstream 164053 13940187 ~ 13942428 (+)
LOC110509680 LOC106563031 coding downstream 182499 13958633 ~ 13996453 (+)
atp6v1g1 LOC106563029 coding downstream 224120 14000254 ~ 14010168 (+)
slc31a1 LOC106563027 coding downstream 238908 14015042 ~ 14028322 (+)
G2154384 NA non-coding upstream 6139 13766276 ~ 13766569 (+)
G2154379 NA non-coding upstream 20034 13752324 ~ 13752674 (+)
G2154340 NA non-coding upstream 61008 13711493 ~ 13711700 (+)
G2154338 NA non-coding upstream 63351 13709142 ~ 13709357 (+)
G2154312 NA non-coding upstream 83239 13688420 ~ 13689469 (+)
G2154396 NA non-coding downstream 10381 13786515 ~ 13786715 (+)
G2154512 NA non-coding downstream 139536 13915670 ~ 13935819 (+)
G2154533 NA non-coding downstream 170335 13946469 ~ 13981651 (+)
G2154564 NA non-coding downstream 236747 14012881 ~ 14013081 (+)
G2154294 NA other upstream 103538 13668289 ~ 13669170 (+)
G2153316 NA other upstream 1012218 12759880 ~ 12760490 (+)
G2152639 NA other upstream 1465270 12300792 ~ 12307438 (+)
G2152150 NA other upstream 2006357 11764224 ~ 11766351 (+)
G2151555 NA other upstream 2406216 11359557 ~ 11432252 (+)
G2154438 NA other downstream 29879 13806013 ~ 13813970 (+)
G2155696 NA other downstream 1242493 15018627 ~ 15093949 (+)
G2157602 NA other downstream 2574583 16350717 ~ 16353665 (+)
G2158499 LOC106563144 other downstream 3413210 17189344 ~ 17191128 (+)

Expression


Co-expression Network