G2154418 (LOC106563033)



Basic Information


Item Value
gene id G2154418
gene name LOC106563033
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 13780659 ~ 13782254 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2463349
TTTGAAGTACATCTGTAATATATGTTGGAATGTATACATTATTTGGTCAAATGTAAATATTTCACATGTATccttaaaaacatttttaatagGTTTTGTAAGTAGACAACACATACAATAGGCATATataggcacacagaattccAGTCCGGTCTACTCAGAGTCCCAACATTGATACAGTAGTtgacgttcctctctctctcccttccaaccGAAGGGTCCCGTTTATGACTTGCCAACAACAAATTGCCAATTGACTcattcatcccctctcctctcccctgtaactactcCCCATGtctttgctgtaaatgagaatgtgttctcagtcaatttacctggtaaaataagggttaaaaaaagaaaaaaaagtcacACACAGATCTAAACCGATTTCACATATTAAACTGGATCTGAGATGAGAAACCTCACTGAGATCCATAACTGTCTCAAACTGTGATCCAGTTTCTGGCCTTATCTTCCGATAGTCAGTCACATAGTTGAGATCTAGATTGAAGTGGCTGATCCAAATTTAGGCCTGATGTTGCGGTCCAAATTCTAATCCAGGTTACGTCAAATTCAGGTGGGGATGCTCATGGTCTTCCCCTTGAAGACCATGGAATAAATGTGGATTATTTTGTACTTTTGTTCCGGATTAAGATTCAGGTGGAGATGCTCAGAGTCATGAAGTGGAGTTTGGATCCGGTTGATTTGGACataaggaggaagaggaatgggtCCAGGCAGGCATGCAGACAGCACAGACACACTGCCACATTGAAGTAGCCGTAGAAGCTGTCCTCTTCACCCGCCAACAGACGCACATAATGCAGGAAGTGGAGGGTCCCGGCGGGGCCGAAACATGCCACAAAAATCACAAACACCAGCGAGCTAGCCTTGACATACAGCGCCCAGTCGTGGTGTGAGTGGTTGAGTTCTCGGACTATCCGTGCATAACACACAGCTGTGACCAACAGCGGGACTAGTAGACCCAGAAAGGTCAGGCCCAGCTTGTAGTAGAGCAGAGGAGCATGGGAGCTGTAGTCCAGTGGAAGAACATCATGGCAAGTGGTGAGGCCTAGCTGAGGGAGGTGGTAGCTCTGCCGGACCAGGAGCTCGGGTATGACAGCAGCCCCAAACACCCCCCAAACAACCACACTGGCCCAGGCGGTATAGGCCCTCTTGGGGAGGCTCTTGTAGAGAAACGGGCGCACCACGGCCAGGTAGCGTTTGACGCTAATACAGGCTAGCGTGTGTGCCGAGCAGTACAGGTTGCCGTAGAAACAGGCTGTGACGATGCGGCAGGCAATCTCGCCGAACACCCAGTGGTTGCCGTGGAGATGGTAGTGGGCCTTGAagacgagggagaggaggagaaagaggtcgGAGACGGCCAGGCTGCAGTAGAGGATGGCCGACGACACCCGCCTGACTTCGGTGGCCACGGCGGACAAGATGGCGATGTTGGCCGGGATCCCCACGACAATGGCCAGCATGTAAAAACTGGGGATGACCCACCTGCTCAGGGGGCCGGCGAGGT

Function


NR:

description
proteinase-activated receptor 3-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2463349 True 1540 TUCP 0.50 3 13780659 13782254
Loading

Neighbor


gene id symbol gene type direction distance location
LOC110509677 LOC106563034 coding downstream 23138 13753775 ~ 13757521 (-)
LOC110509675 par-2 coding downstream 28472 13747735 ~ 13752187 (-)
f2rl1.2 par2 coding downstream 35335 13742537 ~ 13745324 (-)
LOC118945261 NA coding downstream 53322 13722252 ~ 13727337 (-)
LOC110509672 LOC106563037 coding downstream 136940 13633977 ~ 13643719 (-)
LOC110509327 LOC106563032 coding upstream 25153 13807407 ~ 13869870 (-)
LOC110509679 NA coding upstream 151153 13933407 ~ 13936279 (-)
cdc26 cdc26 coding upstream 246056 14028310 ~ 14030112 (-)
si:ch211-202f5.2 LOC106563026 coding upstream 258995 14041249 ~ 14045646 (-)
si:ch211-202f5.3 LOC106563025 coding upstream 272076 14054254 ~ 14056905 (-)
G2154404 NA non-coding downstream 6430 13773742 ~ 13774229 (-)
G2154409 NA non-coding downstream 19740 13760591 ~ 13760919 (-)
G2154373 NA non-coding downstream 40322 13740042 ~ 13740337 (-)
G2154288 NA non-coding downstream 116642 13663724 ~ 13664017 (-)
G2154177 NA non-coding downstream 227019 13489024 ~ 13553640 (-)
G2154419 NA non-coding upstream 1079 13783333 ~ 13783782 (-)
G2154671 NA non-coding upstream 169331 13951585 ~ 13952412 (-)
G2154713 NA non-coding upstream 228178 14010432 ~ 14010637 (-)
G2154714 NA non-coding upstream 230338 14012592 ~ 14013092 (-)
G2154719 NA non-coding upstream 232828 14015082 ~ 14015321 (-)
G2154361 LOC106563107 other downstream 49563 13728833 ~ 13731096 (-)
G2153683 NA other downstream 689303 13087453 ~ 13091356 (-)
G2153174 NA other downstream 1131164 12649176 ~ 12649495 (-)
atg10 atg10 other downstream 1836506 11940630 ~ 11945825 (-)
G2152107 NA other downstream 2058180 11722072 ~ 11722479 (-)
G2154637 NA other upstream 218271 14000525 ~ 14010167 (-)
G2155063 LOC106563020 other upstream 440867 14223121 ~ 14223931 (-)
G2155120 NA other upstream 445566 14227820 ~ 14231006 (-)

Expression


G2154418(LOC106563033) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
End of interactive chart.

G2154418(LOC106563033) Expression in each Bioproject

Bar chart with 15 bars.
G2154418(LOC106563033) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 40.
End of interactive chart.

Co-expression Network