G2154396


Basic Information

Item Value
gene id G2154396
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 13786515 ~ 13786715 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2463325
gttttcagaccttttactcagtactgtgttgaagtacctttggcagcacttacagccttgagtcttcttgggagattctccaattcttctctgcagatcctctcaagctctgtcagattgaatggggagcgttgctgcacagctattttcaggtctctccagagatgttcgaacgggttaaagtccgggctctgactgggc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2463325 True 201 lncRNA 0.48 1 13786515 13786715

Neighbor

gene id symbol gene type direction distance location
LOC110509678 LOC106563033 coding upstream 3810 13779399 ~ 13782705 (+)
LOC110509676 NA coding upstream 39056 13745413 ~ 13747459 (+)
LOC110509673 LOC106563107 coding upstream 55404 13728812 ~ 13731111 (+)
crf-bp crf-bp coding upstream 89029 13678513 ~ 13697486 (+)
LOC110509671 LOC106563039 coding upstream 282486 13498470 ~ 13504029 (+)
LOC110509328 LOC106563105 coding downstream 153472 13940187 ~ 13942428 (+)
LOC110509680 LOC106563031 coding downstream 171918 13958633 ~ 13996453 (+)
atp6v1g1 LOC106563029 coding downstream 213539 14000254 ~ 14010168 (+)
slc31a1 LOC106563027 coding downstream 228327 14015042 ~ 14028322 (+)
prpf4 prpf4 coding downstream 248607 14035322 ~ 14041282 (+)
G2154384 NA non-coding upstream 19946 13766276 ~ 13766569 (+)
G2154379 NA non-coding upstream 33841 13752324 ~ 13752674 (+)
G2154340 NA non-coding upstream 74815 13711493 ~ 13711700 (+)
G2154338 NA non-coding upstream 77158 13709142 ~ 13709357 (+)
G2154512 NA non-coding downstream 128955 13915670 ~ 13935819 (+)
G2154533 NA non-coding downstream 159754 13946469 ~ 13981651 (+)
G2154564 NA non-coding downstream 226166 14012881 ~ 14013081 (+)
G2154565 NA non-coding downstream 226501 14013216 ~ 14013423 (+)
G2154573 NA non-coding downstream 257455 14044170 ~ 14044421 (+)
G2154391 NA other upstream 10381 13772708 ~ 13776134 (+)
G2154294 NA other upstream 117345 13668289 ~ 13669170 (+)
G2153316 NA other upstream 1026025 12759880 ~ 12760490 (+)
G2152639 NA other upstream 1479077 12300792 ~ 12307438 (+)
G2152150 NA other upstream 2020164 11764224 ~ 11766351 (+)
G2154438 NA other downstream 19298 13806013 ~ 13813970 (+)
G2155696 NA other downstream 1231912 15018627 ~ 15093949 (+)
G2157602 NA other downstream 2564002 16350717 ~ 16353665 (+)
G2158499 LOC106563144 other downstream 3402629 17189344 ~ 17191128 (+)

Expression


Co-expression Network