G2154438


Basic Information

Item Value
gene id G2154438
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 13806013 ~ 13813970 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2463371
gtttgaagcctgaaatgtggcaaaaggtcgcaaagttcaagggggccgaatactttcgcaaggcactgtagctagctggctaacattagctaggctaggagttagggttgggtgttagggttaagtttaggggttaggttaaagggttaaggtatcaggaatcaaggtaagacccagatgcataCTGTCGAAGTAACACTGTTTATTGTAGTAACTGGGCAGGCAAGACAGGTCAAGATAGGCAGGGGTCGAAAATCCAGGgtaaggcaaaggtacaggacggcaggcggactcagggtcagggacaggcagggttcagtaatccagaggtggagcaaaggtacaggacggcagacaggctcagggtcaggcagagaggtcaggacggTGGGTACAGGTTCAGgacaggcaatggtcaaaaccgggaggactagcatgGTCGTTATTAGATATTACTGACTGGACGGAACTAGAagctcaagcatttcgctacactcgcattaccatctgctaaccatgtgtatgtgaccaataacatgtgatttgatttgattttagcaaCGAGAGGCTGGGAAACGATAGGAGCTGACAGGAAAAAACGCTGGTATACTTGAACGAACAAGACGAACTGGTAACAatcagacagagaacacaggtataaaaacACAGGGGATAATAGGGAAGATTGGCGACACCTGGAAGGttgtggagacaagcacaaggacaggtgaaacagaacagaacagaatagaaacaGGGCGTGacttaaggttaggattaggggaagggttagctaacatgcaaaATAATTACAAAGTAGCTCAAAAAAAttgtagttgaaaagttgctaattagctaaagttgtccgtaatgagattcaaactcgcaacctttgAGTTTCTAGACGTTTGTGTTATATGCCAACCCATCCACCCCGATGAACCACcctactttagtttttgccttaaaacttattatggctgcaggggcagtattgagtagcttggatgaaatatatgtatatataatatatgcatattattattggtattggatagaaaacaccctgaagtttctaaaactgtttgaatgatgtctgtgagtacaacagaactcatatggcaggcaaaaacctgagaagaaatccaaacaaggaagtggaaaatctgaggttggccgattttcaacccagcccctattgaatacacagtggggtatggataaagttgcacttcctagggcttccactagatgtcaaacgtctttagaaacttgaatgaggcttctactgtgttgtggatgggagctctttgagtcagtggtctggcagagagccaggtcctggtcatgcgcatttcacatgatagcgacctgcgttccatggcttctctacagacataggaattctctggttggaactttattgaagatttatgataacaacatcctagagattgattctatacttagtttgacaagtttcttcgacctgcaATATacctttttgaagttttcgtccaaCGTTCGGATGGACCTGCACAAGCGTTTGGATTTTCgtactaaacgcgctaacaaaagtagctccttgaacataaataatggacattatcgaacaaatcaagcatttattgtgcaactaggattcctgggagtgcattctgatgaagatcgtcaaaggtaagggaatatttataatgtgaatTCTGATTTCTGTTTACTTTATTTtctaatcgtttgtggtgcttcgCTGTAAATcttatttgaaatcggacactgtggtgggattaacaacaagattaacttaattaaaacggtataaaatggaattttaattatgagatttctgttgctttgaatttggcgccctgcactttcaccggctgttgtcatatcgatcccgttaacgggattgcagccctaagaagtaaGTAACCATCGGTCTTATGTAACCCTACCAAACGTGACATATCATATCAAAtcaacatatcatactaatttgagtgtcccagatttacatttaccATGTTaggtctagtctatgagaccaggctgctacAATGGCTTTTTCATATATCATCCCGTTAAAATCCACCTGCTTTCTGCTTAAACACATAGTTTTAGTTTAATGTTATATCAACTCAGCAACAAATAACCTAAACACGCATAAGCAGATATTACTTTTCTGTTTATGGATTTAAATTAGGTTACACACCAAGATGGTGAAACTGACAAGCTAGCTCACAGGTGATTGCCTATATATCACACACacccgcagacacacacacacacacacacacacacacacacattagagcGAAAAAGAGAAGAACTACATACTAGAGCGAGTTTCATAAGAGAGAAAGGTTGGAGGGAACGAGGCACGACATTTGAGAAAGGCCATCGAGTTTTGTAGAGGGTAAGCTACCATATGAGACAGGCagcatggcagagagagagaaggatagagggttggagagagaatcacaacagaaagaaacagagagagcaaggtaaggagagagagagagacaatgcgAGAAAGATaaatggaaagacagagagagagagagagagagagggagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2463371 True 2658 TUCP 0.42 3 13806013 13813970

Neighbor

gene id symbol gene type direction distance location
LOC110509678 LOC106563033 coding upstream 23308 13779399 ~ 13782705 (+)
LOC110509676 NA coding upstream 58554 13745413 ~ 13747459 (+)
LOC110509673 LOC106563107 coding upstream 74902 13728812 ~ 13731111 (+)
crf-bp crf-bp coding upstream 108527 13678513 ~ 13697486 (+)
LOC110509671 LOC106563039 coding upstream 301984 13498470 ~ 13504029 (+)
LOC110509328 LOC106563105 coding downstream 126217 13940187 ~ 13942428 (+)
LOC110509680 LOC106563031 coding downstream 144663 13958633 ~ 13996453 (+)
atp6v1g1 LOC106563029 coding downstream 186284 14000254 ~ 14010168 (+)
slc31a1 LOC106563027 coding downstream 201072 14015042 ~ 14028322 (+)
prpf4 prpf4 coding downstream 221352 14035322 ~ 14041282 (+)
G2154396 NA non-coding upstream 19298 13786515 ~ 13786715 (+)
G2154384 NA non-coding upstream 39444 13766276 ~ 13766569 (+)
G2154379 NA non-coding upstream 53339 13752324 ~ 13752674 (+)
G2154340 NA non-coding upstream 94313 13711493 ~ 13711700 (+)
G2154512 NA non-coding downstream 101700 13915670 ~ 13935819 (+)
G2154533 NA non-coding downstream 132499 13946469 ~ 13981651 (+)
G2154564 NA non-coding downstream 198911 14012881 ~ 14013081 (+)
G2154565 NA non-coding downstream 199246 14013216 ~ 14013423 (+)
G2154573 NA non-coding downstream 230200 14044170 ~ 14044421 (+)
G2154391 NA other upstream 29879 13772708 ~ 13776134 (+)
G2154294 NA other upstream 136843 13668289 ~ 13669170 (+)
G2153316 NA other upstream 1045523 12759880 ~ 12760490 (+)
G2152639 NA other upstream 1498575 12300792 ~ 12307438 (+)
G2152150 NA other upstream 2039662 11764224 ~ 11766351 (+)
G2155696 NA other downstream 1204657 15018627 ~ 15093949 (+)
G2157602 NA other downstream 2536747 16350717 ~ 16353665 (+)
G2158499 LOC106563144 other downstream 3375374 17189344 ~ 17191128 (+)
LOC110509751 LOC106563328 other downstream 5246573 18962089 ~ 19065920 (+)

Expression


Co-expression Network