G2154565


Basic Information

Item Value
gene id G2154565
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 14013216 ~ 14013423 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2463506
cttaaaacttactaccctctccactactgttccatcgatgtggatagaaATTGAAATTGAATAAAAATTGAATCAAAGAAACTGCTTCAATAGAAATCTCCAATAATGCTTGTAGGTGATGTCATGGCAGAGTTGGCTAGCTAAGCCACAGAAACGTCATCGGGGTCGATGCATATGCGTTTTGCCGGATGTTTAGCCTGCATTTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2463506 True 208 lncRNA 0.40 1 14013216 14013423

Neighbor

gene id symbol gene type direction distance location
atp6v1g1 LOC106563029 coding upstream 3048 14000254 ~ 14010168 (+)
LOC110509680 LOC106563031 coding upstream 16763 13958633 ~ 13996453 (+)
LOC110509328 LOC106563105 coding upstream 70788 13940187 ~ 13942428 (+)
LOC110509678 LOC106563033 coding upstream 230511 13779399 ~ 13782705 (+)
LOC110509676 NA coding upstream 265757 13745413 ~ 13747459 (+)
slc31a1 LOC106563027 coding downstream 1619 14015042 ~ 14028322 (+)
prpf4 prpf4 coding downstream 21899 14035322 ~ 14041282 (+)
LOC118945712 NA coding downstream 25913 14039336 ~ 14039471 (+)
LOC118945711 NA coding downstream 27011 14040434 ~ 14040567 (+)
LOC110509688 LOC106563021 coding downstream 158376 14171799 ~ 14175996 (+)
G2154564 NA non-coding upstream 135 14012881 ~ 14013081 (+)
G2154533 NA non-coding upstream 31565 13946469 ~ 13981651 (+)
G2154512 NA non-coding upstream 77397 13915670 ~ 13935819 (+)
G2154396 NA non-coding upstream 226501 13786515 ~ 13786715 (+)
G2154573 NA non-coding downstream 30747 14044170 ~ 14044421 (+)
G2154574 NA non-coding downstream 31030 14044453 ~ 14044814 (+)
G2154575 NA non-coding downstream 31542 14044965 ~ 14045498 (+)
G2154750 LOC106563023 non-coding downstream 56830 14070253 ~ 14071153 (+)
G2154823 NA non-coding downstream 187460 14200883 ~ 14201383 (+)
G2154438 NA other upstream 199246 13806013 ~ 13813970 (+)
G2154391 NA other upstream 237082 13772708 ~ 13776134 (+)
G2154294 NA other upstream 344046 13668289 ~ 13669170 (+)
G2153316 NA other upstream 1252726 12759880 ~ 12760490 (+)
G2155696 NA other downstream 1005204 15018627 ~ 15093949 (+)
G2157602 NA other downstream 2337294 16350717 ~ 16353665 (+)
G2158499 LOC106563144 other downstream 3175921 17189344 ~ 17191128 (+)
LOC110509751 LOC106563328 other downstream 5047120 18962089 ~ 19065920 (+)
LOC118945267 NA other downstream 5052755 19066137 ~ 19068784 (+)

Expression


Co-expression Network